Vibrio sp. STUT-A16: VspSTUT16_34310
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Entry
VspSTUT16_34310 CDS
T10420
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis00061
Fatty acid biosynthesis
vis00071
Fatty acid degradation
vis01100
Metabolic pathways
vis01212
Fatty acid metabolism
vis02024
Quorum sensing
vis04146
Peroxisome
Module
vis_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VspSTUT16_34310
00071 Fatty acid degradation
VspSTUT16_34310
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VspSTUT16_34310
09145 Cellular community - prokaryotes
02024 Quorum sensing
VspSTUT16_34310
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vis01004
]
VspSTUT16_34310
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vis04147
]
VspSTUT16_34310
Enzymes [BR:
vis01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VspSTUT16_34310
Lipid biosynthesis proteins [BR:
vis01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VspSTUT16_34310
Exosome [BR:
vis04147
]
Exosomal proteins
Exosomal proteins of breast milk
VspSTUT16_34310
Exosomal proteins of breast cancer cells
VspSTUT16_34310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
VMAP-M8
Big_6
Motif
Other DBs
NCBI-ProteinID:
BDR20085
LinkDB
All DBs
Position
2:complement(344269..346221)
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AA seq
650 aa
AA seq
DB search
MAQQHNDWADITRLDTFPKVLQHNAKHWPEQVAMREKEFGIWREFTWKDYENRVKWMALA
LQDLGIGEQDVVGLLGDNRPEWVWGELAAHAIKGFSLGIYQDSMHEEVAYLINYAKAKVV
VAEDEEQCDKLLELGDEIPSVEFIIYCDPRGMRKYDDPRLIDVEQVYKKGQLIDKADPDK
YLNMVAATKGSDLSILCTTSGTTSKPKLAQLHSGTFLDHCAAYLRADPRSPGDNYVSVLP
LPWIMEQVYVVGQALISRQIVNFVEEQETMMSDLREIGPNFVLLAPRVWENIVADVSARM
MDSTPFKQKMYKLGMSLANKALEQGKRSKLAEWILLRALRDRLGFSNLTSAATGGAAMGP
DTFRYLQAIGVPLKQLYGQTEMCGAYTVHQADDVDYDSVGVAFDNAEVKVINPDSNGVGE
IIAKSTGMFTGYLNNQEAYDEDVQDGWMHTGDAGYFKDSGHLVVIDRLKDMSETSHGDRY
SPQFIENKLKFSPFIAEAVVVGKGRPWLSAIICIRYAIVAKWAEQRGLAFTNYTNLSAQP
EVYQAIREEVQKVNESLPDAQKISKFILLYKELDADDGELTRTRKVRRGVVAEKYGDIIE
TIYSDDPKVDVDTVITYQDGTKTRIQTSLVIETLIEHEPTLVDSEQRRIA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcaacataatgattgggcagatataacccgcttagatacctttccaaaagtg
ttgcaacacaatgccaagcactggcccgaacaagtcgcaatgcgtgaaaaggagtttggt
atttggcgagagttcacttggaaggattacgaaaaccgcgtcaagtggatggcactggca
ctacaagatttgggtattggtgagcaagatgtcgttggtttgctaggtgataaccgcccg
gaatgggtatggggcgagttagcagcacatgcgatcaaaggtttctcgctgggcatctat
caagattccatgcacgaagaagtggcgtacctcatcaactatgccaaagcaaaagtcgtg
gttgcggaagatgaagagcaatgcgataagctacttgagctcggtgatgagatcccaagc
gtagaattcattatctattgtgacccgcgaggaatgcgcaagtacgacgacccacgactg
attgacgttgagcaggtctataaaaaaggtcaactgatcgacaaagcggatccggataaa
tatctcaatatggttgcggcaaccaaaggcagcgatctttcgattctttgtaccacgtcg
ggtacgacttccaaaccaaagttggctcagctacacagcggcactttcttagatcactgt
gcggcttatctgcgtgccgacccgcgctctccaggcgacaactacgtttctgttctgcct
ttgccttggattatggagcaggtgtatgtggtcggtcaggcgttgatttcgcgtcaaatc
gttaattttgtggaagagcaggaaaccatgatgtctgacctgcgcgagatcgggccgaat
ttcgtgctgcttgcgccgcgtgtatgggaaaacatagtggcagacgtgtctgcgcgaatg
atggattccacaccgtttaagcagaagatgtacaaactgggtatgagcttagccaacaaa
gcgctggagcagggtaaacgctctaagttggctgaatggattcttctgcgtgctctgcgt
gaccgtttaggtttttcgaacctgacatctgcggcaaccggcggtgcggcaatgggaccg
gatacgttccgttatctgcaagcgatcggcgtgccactcaaacagctttatggtcaaacc
gaaatgtgtggtgcgtacaccgtccaccaagcggacgatgtggattacgattccgtcggc
gtcgcgtttgacaatgccgaagtgaaagtcatcaatccagacagcaacggtgtgggcgag
atcatcgcgaaaagtacgggcatgtttactggctacctgaacaatcaggaagcgtacgac
gaagacgtacaagacggttggatgcacacgggcgatgcgggttactttaaagactctggt
cacttggtggtgattgatcgtctgaaagacatgtcggaaaccagtcatggcgaccgctac
tctccgcagtttattgaaaacaaactcaagttctcgccgtttattgcagaagccgtagtg
gtgggcaaaggtcgaccttggctatccgccatcatctgtattcgctacgcgatcgtcgcg
aagtgggcagagcagcgtggcttggcatttaccaactacaccaacttatctgctcaacca
gaagtgtaccaagcgattcgtgaagaagttcaaaaagtgaacgaatccctaccggatgca
cagaagatcagcaaattcattctactttacaaagagctagatgccgacgatggcgagcta
actcgtacgcgtaaagtgcgtcgtggtgtggttgcggagaaatacggagacatcatagaa
accatctacagcgacgatccaaaagtcgatgtggatacggtgatcacttatcaggatggc
accaaaacacgcattcaaacgtcgctagtgattgaaacgcttattgaacatgagccaaca
ctggtggatagcgaacaacggaggatcgcatag
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