Vibrio sp. STUT-A16: VspSTUT16_34950
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Entry
VspSTUT16_34950 CDS
T10420
Name
(GenBank) membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vis Vibrio sp. STUT-A16
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vis02000
]
VspSTUT16_34950
Transporters [BR:
vis02000
]
Other transporters
Pores ion channels [TC:
1
]
VspSTUT16_34950
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Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OmpA_membrane
DUF748
DUF7840
DUF3575
Phenol_MetA_deg
DUF3187
Motif
Other DBs
NCBI-ProteinID:
BDR20149
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Position
2:432124..433140
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AA seq
338 aa
AA seq
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MQSIQGNIMNKVAIAVAAVVAGSSALLNSAQAEMYIGGKVGMTTLDDACYLNSPCDDEAF
GAGLHIGYDFTDIIGLEYGVDFLGDYKANFKSGANTVNTIDGNLTALTLAPKFNWHLNES
WNLFAKIGGAYMMSDDEKDFVPTGSLGAEYTIDRNWSVRAEYQRYQDLSDDVWDDMDANF
FGIGFNYKFAAAPVVAAVVTEEVVEPDPEPVMMSKVHKEEYGTGTFEFDSAKLTDSVSER
LDNFVSFLNEYPQAQVEITGYTDSSGPATYNQKLSERRAQSVADYLTAAGIDSDRLTVKG
MGEENPVADNSTREGREKNRRVEVVVPSFEYQELVQPE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaatacaaggaaacattatgaacaaagtagcaattgcagtagcagcagtggta
gctggtagtagcgcgcttttaaactctgctcaagctgaaatgtatatcgggggcaaagta
ggcatgactacacttgacgatgcttgctatctaaatagcccttgtgatgatgaagctttt
ggtgctggactacatatcggttatgacttcaccgatatcatcgggctagagtatggtgtc
gacttcttaggcgattacaaagctaactttaagtcaggggctaatacagttaatacaatc
gacggcaatttaacggctttaactctcgcacctaaatttaactggcacttgaacgaatct
tggaacttattcgctaagatcggtggtgcttacatgatgtctgatgacgaaaaagatttc
gttccaactggctcgctaggtgctgaatacactatcgacagaaactggagcgtacgcgca
gaatatcaacgctatcaagacctgtctgatgacgtatgggacgacatggacgctaacttc
ttcggtatcggttttaactacaaatttgcggctgcgccagtggttgcggcagttgtaaca
gaagaagtggttgagccagatccagaaccagtgatgatgagcaaagtgcacaaagaagag
tacggtacaggtacgtttgaattcgacagtgctaagctaacagactctgtttcggagcgt
ctagacaacttcgtatcattcttgaacgaataccctcaagctcaagttgagatcactggc
tacacggatagctctggtcctgcgacttacaaccaaaaactgtctgagcgtcgtgctcaa
tctgttgcggattacctaactgctgcaggcattgactcagatcgtttaactgtgaaaggc
atgggtgaagaaaacccagttgctgacaacagcactcgtgaaggtcgtgagaaaaaccgt
cgcgtagaggttgtggttccttcgtttgaataccaagaactagttcaacctgaataa
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