Vibrio sp. STUT-A16: VspSTUT16_36060
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Entry
VspSTUT16_36060 CDS
T10420
Name
(GenBank) transcription regulator
KO
K13652
AraC family transcriptional regulator
Organism
vis Vibrio sp. STUT-A16
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vis03000
]
VspSTUT16_36060
Transcription factors [BR:
vis03000
]
Prokaryotic type
Helix-turn-helix
AraC family
VspSTUT16_36060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
GyrI-like
HTH_AraC
Cass2
NAD-GH
Motif
Other DBs
NCBI-ProteinID:
BDR20260
LinkDB
All DBs
Position
2:complement(543698..544567)
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AA seq
289 aa
AA seq
DB search
MSHQQVSRINDVLFYIHQDISRDLSAKELADVAAYSEQHFHRIFKDVVGESVHQYIRRTR
MEYAANQLMFDTSSSVLDIANKCGFSSVSSFSRAFKATFAMSPGAWRKHDLQVAEKPYLK
DPEVAAGYHRVAKRELPEPKIMEVPQRFAAYVRHEGYNRSIRNAWLILKAWASSENRDFS
VQYGLHHSNPAWVELDKCRYVACMAIDTPLKVRGVVNQMTIPGGLHAVFRLTGVYGELLP
QLSMVLEKWLPNSGFKQRSTPAYVHYHKNHFLSHDEAFELDFYLPISFF
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgagccatcaacaagtttccagaatcaatgacgtgctgttttacattcatcaggacatt
agcagagatttatcagctaaagagctagcagatgtagcagcctattctgagcaacacttc
catcgtatttttaaagatgtggtaggggagtctgtccatcaatatatccgccgcacaaga
atggaatacgccgccaatcaactgatgtttgataccagctcgtcggtgttagacattgct
aacaagtgcggttttagctcggtatcttcttttagccgagcgtttaaagcgacgttcgct
atgtcacctggtgcgtggcgaaagcatgatttacaagtcgcagaaaaaccgtatttgaag
gatccggaagtggctgcgggttatcatcgtgttgcgaaacgcgagttgccagaacctaaa
attatggaggttccacaacgctttgcggcgtatgttcgacatgagggctataaccgttcc
attcgcaatgcgtggctgattttgaaagcgtgggcaagttctgagaatcgggacttttcg
gttcaatacggcttgcatcactccaaccctgcttgggtagaactcgacaagtgtcgctat
gtggcttgtatggcgattgatacgccgctcaaagtgcgtggcgtcgtgaatcaaatgacc
atcccaggcggtttacatgccgtctttcgcttaacgggagtatatggtgagcttcttcct
caactgagtatggtattagagaagtggttgcctaactctggctttaaacagcgttctacg
cccgcttatgtccattatcataaaaatcactttctcagccatgatgaggcgtttgagctg
gatttctatctacccattagcttcttctaa
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