Vibrio sp. STUT-A16: VspSTUT16_38800
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Entry
VspSTUT16_38800 CDS
T10420
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis00300
Lysine biosynthesis
vis00470
D-Amino acid metabolism
vis01100
Metabolic pathways
vis01110
Biosynthesis of secondary metabolites
vis01120
Microbial metabolism in diverse environments
vis01230
Biosynthesis of amino acids
Module
vis_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VspSTUT16_38800
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VspSTUT16_38800
Enzymes [BR:
vis01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VspSTUT16_38800
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BDR20534
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Position
2:867340..868542
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AA seq
400 aa
AA seq
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MSNSLSLPTRISQQVHTLAQQQNQPLCAYLYDLKALEEHIKQLRHVLPKNVELFYAAKAN
PSGPILKTLAPYVDGFEAASGGELTLLHQQQLDKPLIFGGPGKMPSELQQAIELDVDAIH
VESLTELQRIGALTERLNRPTSIFLRMNIDIGDITLSKLAMGGKPTPFGFDESELSNTLM
LLRDFPQVSLKGFHFHLMSHQLDVERHLALMQRYFQVVKAWQQEFELGELMINLGGGMGI
NYQNPEQHFPWMEFCDKLEFLIAKEQVQDWTLRFECGRFITAACGYYVMEVLDIKQNLGE
NFVIARGGTHHFRTPAAQSHNHPFVILKSEQHHEISHPIQHAQATFVGQLCTPKDVLARN
QHVAHADIGDYVVFTLAGAYAWNISHQNFLMHEPPIFHYF
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattcactctccctaccgacacgtattagccagcaagttcacacgctcgcacag
cagcaaaatcaacccttgtgcgcgtacttgtatgacctaaaagccttagaagaacacatc
aaacaactgcgtcacgttttgccgaaaaatgtcgagctattttacgcagccaaagccaat
ccatcgggcccgattctcaaaacgctcgcgccgtatgtcgatggttttgaagcggcatct
ggcggggagttgacactcctccaccagcagcaactcgataagccattgatcttcggtggc
ccaggaaaaatgccaagtgaattgcaacaagcgattgagctggatgttgatgcaattcat
gtcgaaagcctcaccgagctgcaacgcattggagcactaaccgagcgcctcaaccgcccg
acttcgatctttttgcgtatgaacatagatatcggcgacatcacgctcagcaagctggcg
atgggaggcaagccgactccatttggttttgacgagtcagaactgagcaatactttgatg
ttgctgcgcgatttcccgcaagtgtcactcaaaggcttccattttcacttgatgtcgcat
cagctcgatgttgaacgtcacttagcgttaatgcagcgctatttccaagtcgtgaaagcg
tggcaacaagagtttgaactcggtgagctgatgatcaacttaggcggaggcatggggatt
aactaccaaaaccctgagcaacactttccgtggatggagttttgcgacaagttggaattc
ctcatcgctaaagagcaagtgcaagattggacactgcgttttgaatgcggacgtttcatc
acggcggcatgcggttattacgtaatggaagtgctggatattaagcaaaatcttggcgaa
aactttgtcatcgcgcgcggaggaacccaccatttccgcacgccagcagcgcagagccat
aatcatccattcgtcatcctgaaaagcgagcaacaccatgagatttctcatccaattcag
catgcacaagcgacctttgtcggccaactttgtacgcccaaagatgtgctggcacgcaat
caacacgtcgcccacgccgatattggtgattatgttgtgtttaccttagcgggcgcctat
gcctggaacatctcccatcaaaacttcttgatgcatgaaccgccgatcttccactatttc
taa
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