Vibrio sp. STUT-A16: VspSTUT16_40060
Help
Entry
VspSTUT16_40060 CDS
T10420
Name
(GenBank) GGDEF domain-containing protein
KO
K20956
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VspSTUT16_40060
Enzymes [BR:
vis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VspSTUT16_40060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
U3snoRNP10
Motif
Other DBs
NCBI-ProteinID:
BDR20660
LinkDB
All DBs
Position
2:complement(1006207..1007304)
Genome browser
AA seq
365 aa
AA seq
DB search
MKLSEPTYQKQRALQYSTTSKMLLVVFATSLLLANVLLLQQTRALSQNFNNEQKQATWFL
FQLSKELSELVGEARRVDENVLNIEGAELQYELAWSRFDLLISSNEAYTFFSRNNMHQYF
IDLFEEFQGLEAQLVEARTGDSQAAAQFYRSTQTLYLSLVDFVNQNFRLSSKVYEAQKGE
TQRLMQAQYMLFATFVLSILSLTYFFYRESHFHRKLALSDPLTHLGNRNALFIKLNELTQ
EKKPFSLWILDLNGFKSVNDTHGHQVGDTVLREIARRLKSMALNDFTVYRMGGDEFAVIL
EGEHVDEEGVREHINAVFDAPILNSDNVATLSTSMGLAQYPKDSNNVDFLISIADKRMYK
MKFQR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatcagaacccacctatcagaagcagagagcactacaatactctacaaccagt
aaaatgttgcttgtggtgtttgccacttctttgcttctcgcaaatgtattgcttctgcag
cagacacgcgcactgtcacaaaactttaataatgagcaaaaacaagcaacctggttttta
ttccaactctctaaagagctttcggaacttgtcggagaagcgagacgagtcgatgaaaat
gtattaaatatcgaaggtgcagagctgcaatatgaactggcctggagtagattcgattta
ttaattagtagtaatgaagcctacacttttttctctcgaaataatatgcatcagtatttc
attgatctttttgaggaatttcaggggttggaagcgcaattagttgaagcaagaactggc
gatagccaagctgcggctcaattttatcgatccactcaaacgctgtacttaagcttggtc
gatttcgttaatcagaactttcgcctaagcagcaaagtctatgaggcgcagaaaggagaa
acacaacggttaatgcaagcgcagtatatgctgtttgctacgttcgttttgtcgatcctg
tctctgacttatttcttttatcgtgaatcccatttccatagaaaactggcgctcagcgac
ccactgactcatcttggaaatcgcaatgcactatttatcaagctgaatgagctcactcaa
gagaaaaagcctttttctctgtggattttagatttaaatggttttaaaagtgtcaacgat
acacacggtcaccaagtgggagacaccgtactgcgtgaaattgctagacggcttaaatct
atggcgttgaatgattttaccgtctatcgcatgggaggcgatgagttcgccgtcatcctc
gaaggggagcatgttgatgaagaaggcgttcgtgagcatatcaatgcggtatttgatgcg
ccaatactaaactccgacaacgtcgcaacactatcaaccagcatgggcttagcccaatac
ccaaaagacagtaacaatgttgactttcttatcagcatagcggataagcgcatgtacaaa
atgaaatttcaacgttaa
DBGET
integrated database retrieval system
