Vibrio sp. STUT-A16: VspSTUT16_40400
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Entry
VspSTUT16_40400 CDS
T10420
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
vis Vibrio sp. STUT-A16
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vis03000
]
VspSTUT16_40400
Transcription factors [BR:
vis03000
]
Prokaryotic type
Helix-turn-helix
Other families
VspSTUT16_40400
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GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
Phage_NinH
Motif
Other DBs
NCBI-ProteinID:
BDR20694
LinkDB
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Position
2:1039455..1040627
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AA seq
390 aa
AA seq
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MIKLSIWKIEMVILDHSLAQQIVDRTMSIIGHNVNVMNSAGIIIGSGDPKRVGQVHDGAV
LALNHGDSLELNEQQCLTLQGVKPGINMLLKLHGDVVGIVGVTGEPEKIRDFAKLVKMTA
ELTIEQAALVEKFQWDRRHREEFILAWINGKLTDEELKDWAMRLSIDITQPRVATVIEVS
TPSASKSMKSVRNIVELLEYPERNNLVAIVSVNEIVVLKPCHSAKLWDSQIESERIDKLM
SRLSDHDSHTFHIALGQLFNEPKDVALSYQSAKQVLAIGKQFYPEKRKYLFDELRLPVLL
APLADIWQGEQIIDGVKRLKEKDKSGQLLKTLDALFECNGNVTECSKMLFIHRNTLRYRL
EKITEITGLPTTNFVGLAELYIATRLSKMA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgattaaattgtcaatctggaaaatcgaaatggttattctcgaccactccttagcacag
caaattgtcgatcgaaccatgtccatcattggtcacaacgtaaatgtgatgaactcagcg
ggcatcatcattggcagtggcgatccaaaacgcgttgggcaagtgcatgatggcgcggta
ttggcgttgaatcacggcgattcgctagagctgaatgagcagcaatgtttgacgttgcag
ggtgtcaaacccggaatcaatatgctgttgaaattgcatggagacgtggtcggtattgtt
ggtgtgacaggcgagcccgagaaaattcgagatttcgccaaactggtcaaaatgaccgct
gaattgacaatcgagcaagccgcgctggtggaaaaatttcagtgggacagacgtcatcgc
gaagagtttattctggcttggatcaatggcaaattgaccgatgaagagctgaaagattgg
gcgatgcgtctttctatcgatattactcaaccacgggtggcaacggtgattgaagtctcg
acgccgtccgcttcaaaaagcatgaagagtgtgcgcaatattgttgagctgcttgaatac
ccagagcgtaacaacctcgttgcgattgtctcagtgaatgaaattgtggtgttgaaaccg
tgtcattccgccaagctgtgggatagccaaatcgaaagtgaacgcattgataagttgatg
tcgcgtttaagtgatcacgattcgcatacgtttcacattgcgctggggcagctgtttaat
gagcctaaagatgtcgcgttgtcataccaaagcgcgaagcaggtattagctattggcaag
cagttctacccagagaaacgtaagtacctgttcgatgaacttcgtttgcctgtgctgttg
gcgccgttggcggatatttggcaaggtgaacaaattattgatggcgtgaaacggttgaaa
gagaaagacaaatccgggcaattgctgaaaaccctagatgcattgtttgaatgcaatggc
aatgtaacggaatgctctaaaatgctgtttattcaccggaacactctgcgttatcggtta
gaaaaaatcaccgagataacagggctgccaaccaccaattttgtggggttagcggagctt
tatattgcgactcggctctcaaaaatggcgtga
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