Vibrio sp. STUT-A16: VspSTUT16_43710
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Entry
VspSTUT16_43710 CDS
T10420
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis00630
Glyoxylate and dicarboxylate metabolism
vis00680
Methane metabolism
vis01100
Metabolic pathways
vis01120
Microbial metabolism in diverse environments
vis01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VspSTUT16_43710
09102 Energy metabolism
00680 Methane metabolism
VspSTUT16_43710
Enzymes [BR:
vis01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
VspSTUT16_43710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
Fer2_4
NAD_binding_8
Fer4
Fer4_9
Fer4_7
Fer4_6
DAO
FAD_oxidored
Fer4_8
FAD_binding_2
Fer4_16
NAD_binding_7
Fer4_2
Thi4
HI0933_like
Fer4_10
FAD_binding_3
Fer4_18
Fer4_21
Amino_oxidase
Fer4_15
Fer4_17
Fer4_22
Fer4_4
AlaDh_PNT_C
Fer4_3
Fer4_Nqo3
2-Hacid_dh_C
Catalase_C
Motif
Other DBs
NCBI-ProteinID:
BDR21025
LinkDB
All DBs
Position
2:1394486..1398754
Genome browser
AA seq
1422 aa
AA seq
DB search
MIEIVIDGKYRIVEEGLTLLEAAKVCGVEIPSLCGMNKSNEKIPCDLCVVEVESGGTKRA
CDLKVYRGLNVVTQSEQLSEHRRKALNRIMTDHYADCEAPCKTACPAGVDIQSYLYHISQ
NDHQKAIEVIKRTLPMPLSIGRVCPAFCESECRRSLVDEPIAIRQLKRHAADADLAAHEA
YVPEKKPAKHRKIAVVGSGPGGLTAGYYLSNEGYDVTVFESMPKAGGWLRYGIPEYRLPK
DILDKEIELMCRNGMQVETNKKLGVDFTLSQLSEDYDAVCLAVGASQAVEMNYPGSDLDG
CYLGVDYLKDYVIEQNYVTGKKVAVIGGGNTAIDCARTARRAGADTTLIYRRTRDEMPAE
DYEIVEAEHEGVKFHFLTNPAENIADENGRVKAIRLERMALGEPDASGRRSPKPTGEFFT
EAFDTVIAAVSQKPDLSFLENDELSIPLTRWNTSESNAQTMHTGTGNIFSIGDFRRGPAT
AVEAVGDGRVAAKAIDLFLNGDMADMPKPAFNSRKEKKLVQVDPLHFENIQKVARSIMPE
LTPAQREQSFAEVELGFDNEEAMKEAARCLECGCQANTDCALRDYSTEYHAEQHFDVSVD
VSSANVIGHQDWLDLRAKDLRHKYEVDRSSEFIEFDANRCISCGQCIQACREQAVHGVLS
FVSDKNGRPALRPDDRPRFRFDEKGASCSGLTLMGDSKCVQCGACVQACPTGAMVDSRDR
SQGRTEHLKAVDTICTYCGVGCKLTMFVDERQNKIRYVKGADSPVNQGMLCVKGRFGFDF
ISSEERLTTPLIRKDGWLQPATWDEAIQLVASKLSTIKQDFGSNALAGFSSAKTTNEDNY
AFQKFIRRELGTNNVDHCARLCHASSVTGLEASLGSGAMTNDIPSIKHSDVIFIIGSDTT
SAHPIIASHIKQAIRHHGARLIVADPKRVDMAEHAELYLAHRPGTDVMLLNGVMQQIIKN
GWYDQEYIEERVDGFDTLLQEVMSPAYNLDKVELVTGVKADDIFAMARMIGTAKRTAVYY
SMGITQHTTGHDNVRSIANLQLLCGNIGIEGGGINPLRGQSNVQGACDMGALPNCYPGYQ
KVYNPIVRQKFAIEWDAPNLPSEQGLTLTEIIDAACKREVRGMYIMGENPVLSDPNQAHV
IEGLEALDFLVVQDIFLTETAQYADVVLPSCSFAEKSGHFTNTERRVQRVNAAVKAPGEA
KEDWWIIQAIANAMGSDWHYQCVSEITSEIARVTPQYAGLRWDAITPNGVQWPSNKNNPN
GTRIMHQTQFTRGKGQMVGVPFRYAAELPDEEYPLVLTTGRVLEQFHTGTMTRKTKGLDN
LAGPRAMISVEDAEAIGIHNGQRLKVSTRRGSIEIDAFVTKRMQKGVVFIPFHFVESPVN
RLTTTATDPHAKIPEFKVAAVKIEISETAAQPEPVEEEVHHV
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgtcatcgatggaaaatatagaattgtagaagaggggctaacccttctg
gaagcagccaaagtgtgtggggtcgaaatcccttcactgtgcggaatgaacaaaagtaac
gagaaaattccgtgtgatttgtgtgttgtcgaagtggaaagtggcggaactaagcgcgcc
tgtgatctcaaagtgtaccgcggtctcaatgtcgtcacacaatcagaacaactgagtgag
caccgcagaaaagcgctcaaccgaatcatgacggaccactacgccgactgtgaagctcca
tgcaaaacggcgtgtcctgctggggtagacatccaatcttacctctaccatatctcgcaa
aacgatcatcaaaaagcgattgaagttattaaacgcacactgccaatgccgttgtcgatt
gggcgcgtgtgtccggcattctgcgaaagtgagtgtcgccgttctttggtggatgagccg
attgccattcgccaactcaaacgccatgccgcagacgcagatttagcggcgcatgaagcg
tatgtcccagagaaaaaaccagcgaagcatcgcaagatcgccgttgttggtagtggcccc
ggtggcttaacggcaggttattacttgtcgaatgaaggttatgacgtcaccgtatttgag
tccatgccaaaagcaggcggttggctacgctacggcattcctgaatatcgcctacccaaa
gacattctagacaaagaaatcgaactgatgtgccgcaacggcatgcaagttgaaaccaac
aaaaagcttggtgttgatttcacgctgtctcaattgagtgaagactacgatgctgtctgt
ttggctgtgggggcgtctcaagcggtagaaatgaattatcctggtagcgacttggacggt
tgctacctcggtgttgattatctgaaagattacgttatagaacaaaactacgttacgggc
aaaaaagttgccgtgattggtggtggtaacactgcgatcgactgtgcgcgtacggcgcgt
cgtgcgggtgccgataccactttgatctatcgtcgaactcgtgacgaaatgccagccgaa
gactacgaaatcgtcgaagctgaacatgagggcgtgaagttccatttcttaacgaatccg
gcggaaaacatcgcggatgaaaacggccgcgtgaaggcaattcgattagaacgaatggcg
ttaggtgagccagatgcgtctggtcgtcgtagtccgaaaccaacgggtgagttctttact
gaagcatttgataccgtgattgcagcggtatcgcaaaagccggatctcagcttcttagaa
aacgatgagctctccattcctctaacgcgttggaacacatctgaatccaatgcgcaaacc
atgcacacgggtacgggcaatatcttcagtatcggtgattttcgtcgtggtcctgcgaca
gcggttgaagcagtgggagacgggcgagttgcggcaaaagcgattgatctgttcctcaat
ggcgatatggcggatatgccgaaacctgcgttcaactctcgtaaagagaaaaaactggta
caggttgacccacttcattttgaaaacatccaaaaagttgctcgttcaatcatgccggag
ttgactccagcgcagcgtgagcagagttttgctgaagtggaactgggctttgataacgaa
gaggccatgaaagaagcggcgcgctgcttagagtgtggttgccaagcgaataccgactgt
gccttgcgagattactcaacggaatatcatgccgagcaacatttcgatgtttccgtggac
gtttcctctgctaacgtgattggtcatcaagattggctcgatttgcgagcgaaagatctt
cgtcataaatacgaagtagaccgcagttctgagttcattgaatttgatgctaaccgctgc
atcagttgtggtcagtgtattcaagcatgccgcgagcaagcggtacatggtgtgttgagt
tttgtgtcggataaaaatggccgaccagctttacgaccagatgatcgtccacgattccgt
ttcgatgaaaaaggcgcaagttgcagcggtttgacgctcatgggcgattcaaaatgcgtg
caatgtggggcgtgtgttcaggcatgtccaacgggcgcgatggtggacagccgtgaccgc
tctcaaggcaggaccgaacatctaaaagccgtcgataccatttgtacctattgtggtgtg
ggttgtaagttgaccatgtttgtcgatgagcgacaaaacaaaatccgctatgtaaaaggg
gcggattcgccagttaaccaaggaatgctgtgcgtgaaaggccgttttggttttgatttc
attagcagcgaagagcgtttaacgacaccactgattcgtaaagatggttggttgcagcca
gcaacttgggacgaagcgattcagctagtggcttcgaagctttcgaccatcaagcaagat
tttggtagcaacgcactggccggattctcttcagcgaaaaccactaacgaagataactac
gcgtttcaaaaattcatccgtcgtgaacttggtacgaacaacgttgatcactgcgcacgt
ttgtgtcacgcatcaagtgtgactgggcttgaagcatcgttggggagtggtgcgatgacc
aacgacattccgagcattaagcattccgatgtgatctttattatcggttctgacaccaca
tctgcgcacccgatcattgcttcgcacatcaaacaggcgattcgtcatcacggggcacgc
ttgattgtggcagacccgaaacgagtggacatggctgaacatgcagagctgtacttggcg
catcgtccgggcacggatgttatgttgctcaatggcgtgatgcagcaaatcatcaaaaat
ggttggtacgatcaagaatacatcgaagagcgcgtcgacggctttgataccttgcttcaa
gaggtgatgtcgccagcgtacaatctcgacaaagttgagttagtgacgggcgtaaaagcg
gacgatattttcgcgatggcgcgaatgatcggtacggcaaaacgcacggcggtgtattac
tcaatgggtattacccagcatacaacagggcacgacaacgttcgttcgattgcaaacctg
caattgttgtgtggcaacatcggtattgagggtggtggtattaacccactgcgcggtcaa
tcaaacgtacaaggtgcgtgtgatatgggcgcattgccgaactgttatccgggataccaa
aaagtgtataacccgattgttcgtcagaaattcgcgattgagtgggatgcgccgaactta
ccttctgagcaagggcttaccctaacggaaatcatcgatgcggcgtgcaaacgagaagtt
cgcgggatgtacatcatgggcgaaaacccagtactgagcgatccaaaccaagcacacgtg
attgaagggttggaagcactcgacttcttggtcgtgcaagacatcttcctcaccgagacg
gcgcagtacgccgatgtggtattgccttcttgttcatttgcggaaaaatccggtcacttc
accaatactgagcgacgcgtgcagcgcgttaatgcggcagtgaaagcgccgggtgaggcg
aaagaagattggtggatcattcaagcgatcgcaaacgcgatgggtagcgattggcattac
cagtgcgtttctgaaatcactagcgagatcgcgcgtgtaacgccgcaatatgcagggttg
cgttgggacgcgatcacgccgaacggtgttcaatggccaagtaacaagaacaatccaaac
ggtactcgtattatgcaccaaacccaatttacccgagggaaaggtcaaatggtgggcgtg
ccgttccgctatgcagctgagttgcctgatgaagagtatcctttggtgcttacaacaggg
cgtgtgctagaacagttccacaccggtacgatgacgcgcaaaacgaaagggttggataac
cttgctgggccaagagcgatgatcagtgttgaagatgctgaagcaattggtatccataat
ggtcagcgcctaaaagtgtcgactcgtcgtggcagcatcgaaattgatgcgtttgtgact
aagcgaatgcaaaaaggcgtcgtgtttattcctttccatttcgttgagtcgccagtcaac
cgcttgacgactacggcaacggacccgcatgcgaaaattcctgaattcaaagtcgcagcg
gttaagattgaaatcagtgaaacggccgctcaaccagagcctgtcgaggaggaggtacac
cacgtctaa
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