Vitreoscilla sp. C1: ADP71_03870
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Entry
ADP71_03870 CDS
T05336
Name
(GenBank) subunit B of UvrABC system
KO
K03702
excinuclease ABC subunit B
Organism
vit
Vitreoscilla sp. C1
Pathway
vit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ADP71_03870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vit03400
]
ADP71_03870
DNA repair and recombination proteins [BR:
vit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ADP71_03870
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ADP71_03870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
AAA_30
DEAD
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QJQ52144
LinkDB
All DBs
Position
complement(313326..315338)
Genome browser
AA seq
670 aa
AA seq
DB search
MNIIQYPDSPFSLHQPFPPAGDQPTAIQGLIEGLQDGLSMQTLLGVTGSGKTYTMANVIA
QMGRPAIIMAHNKTLAAQLYAEMRGFFPDNAVEYFVSYYDYYQPEAYVPSRDLFIEKDSS
INEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGDPSEYHQMILHLKEGGKLEQRDIIA
RLVTMQYERGDMDFERSSFRVRGDVIDVFPAENSDSALRISLFDDEIESLQLFDPLTGRI
EQKLARYTVYPSSHYVTPHATVLKACETIKKELAKRIQFYNDEIRLVEAQRIEQRTRFDL
EMLYEMGFCKGIENYSRHFSRRPEGAAPPTLFDYLPKDALLFMDESHVTVPQVGAMYKGD
AARKQNLVDYGFRLPSARDNRPLKFEEFETLMPQTIFVSATPAQYEEANASQVVEQVVRP
TGLLDPILEIRPVGTQVDDLMSEITQRAAIGERVLVTTLTKRMAEQLTDYYTDLGIKARY
LHSDLDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSRRSL
IQTIGRAARNVNGKAILYADKITDSMQVAIDETERRRAKQIAFNAEHGITPTQIVKKVGD
LIDGVYHDDGGKKSAAKEQHFNSEEAVIKEITRLEKAMVTASRNLKFEEATELRDQIKAL
KENWLFGAAP
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatccaatatcccgacagcccttttagcttgcatcaaccatttccccctgca
ggcgaccaacccacagccatacaaggcttgattgaaggtttacaggacggcttatccatg
caaactttgctcggggtcacaggttcaggcaaaacttacaccatggccaatgtgattgcg
caaatgggtcgtcctgccatcatcatggcgcacaacaaaactttggcagcgcaactgtat
gccgagatgcgcggcttttttcctgacaatgcagtggaatatttcgtgtcttattacgat
tattaccaacctgaagcgtatgtcccgagccgcgatttgttcattgaaaaagattccagc
atcaacgaacacatcgaacaaatgcgcctctccgccaccaaaagcttgatggagcggcgc
gatgtggtgattgtggcgacagtttccgcgatttacggcattggtgatccatcggaatac
caccaaatgattttgcatctgaaagaaggtggcaaacttgagcaacgcgacatcattgcg
cgcttggtaacaatgcaatacgagcgtggcgacatggattttgagcgcagttcgtttcgc
gtgcgcggtgatgtgattgatgtatttccagcagaaaactccgacagcgcattgcgcatc
agtttgtttgacgatgaaattgagtctttgcaattgtttgatccgttgacaggacgcatc
gagcaaaaattggcgcgttatacggtgtatccgtctagccattacgtcacgccgcacgca
accgtcctgaaagcctgtgaaaccatcaaaaaagaattggccaaacgcattcagttttac
aacgatgaaatccgtttggttgaagcgcaacgcatcgagcagcgcacgcgttttgatttg
gaaatgctgtatgaaatgggcttttgcaaaggcattgaaaactactcgcgccacttttca
aggcggcctgaaggcgcagcaccgccaactttattcgattatttgcccaaagacgcattg
ctattcatggacgaatcgcatgtgaccgtcccgcaagtgggcgcgatgtacaaaggcgac
gcggcgcgcaaacaaaacttggtcgattatggttttcgcctgccttcggcgcgtgacaac
cgtcccttaaagtttgaagaatttgaaactttgatgccgcaaaccatttttgtctctgcc
acgcccgcccaatatgaagaagcgaatgcgtcccaagtggtcgaacaagtggtgcgtccg
acaggcttactcgacccgattttagaaattcgtcccgttggcacgcaagtagacgacttg
atgagcgaaatcacgcaacgcgccgccattggcgagcgggttttggtcacgactttgacc
aaacgcatggccgaacaattgaccgattactacaccgatttgggcatcaaagcacgttat
ttgcacagcgatttggacaccgttgagcgcgttgaaatcattcgtgatttgcgtttgggc
gtgtttgatgtattggttggcatcaatttattgcgggaaggcttggacattccggaagtg
tctttggtcgcaattttggatgcggacaaagaaggctttttgcgcagccgcagaagtttg
attcaaaccataggtcgtgccgcgcgcaatgttaacggcaaagcgattttgtatgccgat
aaaatcaccgattcgatgcaagtggcgatagacgaaaccgaacgccgccgtgccaaacaa
atcgcgttcaatgccgaacacggcattacaccgacacaaattgtcaaaaaagtcggcgat
ttgattgatggtgtttaccatgatgatggtggcaaaaaatcggctgcaaaagaacaacac
tttaacagtgaagaagcggtgatcaaagaaattacccgtttggaaaaagcgatggtgacc
gcttcgcgcaatttgaaatttgaagaagctaccgaattgcgagaccaaatcaaagcttta
aaagaaaattggctatttggcgctgcaccttaa
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