Vitreoscilla sp. C1: ADP71_04490
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Entry
ADP71_04490 CDS
T05336
Name
(GenBank) subunit epsilon of DNA polymerase 3
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vit
Vitreoscilla sp. C1
Pathway
vit03030
DNA replication
vit03430
Mismatch repair
vit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ADP71_04490
03430 Mismatch repair
ADP71_04490
03440 Homologous recombination
ADP71_04490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vit03032
]
ADP71_04490
03400 DNA repair and recombination proteins [BR:
vit03400
]
ADP71_04490
Enzymes [BR:
vit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ADP71_04490
DNA replication proteins [BR:
vit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ADP71_04490
DNA repair and recombination proteins [BR:
vit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ADP71_04490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
cpYpsA
Motif
Other DBs
NCBI-ProteinID:
AUZ04241
LinkDB
All DBs
Position
358370..359719
Genome browser
AA seq
449 aa
AA seq
DB search
MLRHDDLHTLQQQLQFLATPIVIIDTEATGGNLYQDRLTEVALIRFDEHGIHTYEQLINP
QMTISPFIEELTGISNDMVAAAPLFEDIADELAHFLKDAVLFAHNSRFDYHFLRLAFKRC
GKQLSMPQLCTVKLSRQLYPEHFKHNLDSLIERFHIVLPQRHRAMADVAALTQFLAQASQ
ERGHLWQSALYKHITPSLLPDWLPEHLKQQLQALPDEYGMVLIWHKDAKQPKVRVCEHMY
HDMCHKLHAKQAQDWFASIVKIEGFAAIGPLDAAVMSSQYADPKQHAFYTIRLIKNDQQR
LQAKIQPLGTQITHEPPFGVFAHPKAAKKAILEWAREHGFCPKYLDILPQTLSEQTPCPI
HSSKKCHGWCPQLNEQEDIDAALRQEMTKLPIAGWQQRWPHNAQEVDLVTGQTKQWHVAG
SAIQTEDGLWLWDARVFQALKEHFRKPQA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtcacgatgacttacataccttgcagcaacaactgcaatttttagcaaccccc
atcgtcatcatcgataccgaagccacgggtggcaatttataccaagaccgtttgaccgaa
gtggcattgattcgctttgacgaacacggcatacatacttatgagcaattgattaatcct
caaatgaccattagccctttcattgaagagcttacaggcatcagtaatgatatggtggca
gctgcacctttgtttgaggatattgcagatgaattggcacattttttaaaagatgctgtt
ttgttcgctcacaacagtcgttttgattatcattttttacggttggcatttaaacgttgc
ggcaaacaattgagcatgccgcaattgtgcacggtgaaattgtcacgccaattgtatcct
gaacatttcaaacacaacttagacagtttgattgaacgttttcacattgttttaccgcaa
cgtcaccgcgcgatggcagatgtggcagctttaacgcaatttttggcacaagcaagtcaa
gaacgtggccatttatggcaatctgctttgtacaaacacattacaccaagcttgttgcct
gattggttgcctgagcatttgaagcaacaattacaagccttaccagatgaatatggcatg
gttttgatttggcacaaagatgccaaacagcccaaagtgcgggtgtgtgaacacatgtat
catgatatgtgtcacaaattacatgccaaacaagcccaagattggtttgccagtattgtc
aaaatagaaggttttgcggccattggaccattggatgctgcagtgatgtctagccaatat
gccgatcccaagcagcatgctttttataccatacgtttaattaagaatgaccaacagcgt
ttacaagccaaaatccaacctttgggtacgcaaatcactcacgaacctccttttggcgtc
tttgctcatcccaaagctgccaaaaaagccatcttagagtgggcgcgtgaacatggcttt
tgcccaaaatatttggatattttgccgcaaacgttgtctgaacagactccttgtcctata
cacagtagcaaaaaatgtcatggttggtgtcctcaattgaatgaacaagaagacattgat
gctgccttgcgtcaagaaatgaccaagttgcctattgcaggttggcaacaacgttggcca
cacaatgcccaagaggtggatttggtcacagggcaaaccaagcaatggcatgttgcaggt
tctgccattcaaacggaagatggtttgtggctgtgggatgcgcgggtttttcaagcttta
aaagaacattttcgcaagccacaagcttaa
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