Vitreoscilla sp. C1: ADP71_05750
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Entry
ADP71_05750 CDS
T05336
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
vit
Vitreoscilla sp. C1
Pathway
vit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ADP71_05750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vit03019
]
ADP71_05750
Messenger RNA biogenesis [BR:
vit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ADP71_05750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
SAMP2
Motif
Other DBs
NCBI-ProteinID:
AUZ04355
LinkDB
All DBs
Position
complement(471069..471617)
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AA seq
182 aa
AA seq
DB search
MLDREGYRPNVGIIIVNNRNQVFWGKRVREYNWQFPQGGIKPGESPEAAMYRELMEEVGL
SPHHVKILGRTRDWLRYDVPSTWVKREWRGSYRGQKQIWYLLRLTGRECDVYLRANTKPE
FDAWRWHDYWAPVDEVIDFKRNVYLDALQELSRFLRPLENWETYQQRKQHSIGINVSLNQ
DA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgttagacagagaaggttatcgccccaatgttggcatcatcatcgtcaacaatcgcaat
caagtattctggggcaaacgtgtacgagaatacaactggcaatttccacaaggcggcatc
aaaccaggcgaaagcccagaagcagccatgtatcgagaattgatggaagaagtcggcttg
tcaccacaccatgtcaaaatcttagggcgcacacgcgattggctgcgctacgatgtgccc
agtacttgggtgaaacgtgaatggcgcggttcttatcgtgggcaaaagcaaatttggtat
ttattgcgcctaactgggcgtgaatgcgatgtgtatttgcgtgccaataccaaacctgaa
tttgatgcatggcgttggcatgattattgggcacctgtcgatgaagtcatagacttcaaa
cgcaatgtctatttggatgccttacaagaattatcgcgttttttaaggccgcttgaaaac
tgggaaacctatcaacaacgcaaacaacactctattggaatcaatgtcagcctgaaccaa
gatgcgtga
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