Vitreoscilla sp. C1: ADP71_11290
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Entry
ADP71_11290 CDS
T05336
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vit
Vitreoscilla sp. C1
Pathway
vit03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vit00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ADP71_11290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vit03019
]
ADP71_11290
03009 Ribosome biogenesis [BR:
vit03009
]
ADP71_11290
03036 Chromosome and associated proteins [BR:
vit03036
]
ADP71_11290
Enzymes [BR:
vit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ADP71_11290
Messenger RNA biogenesis [BR:
vit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ADP71_11290
Ribosome biogenesis [BR:
vit03009
]
Eukaryotic type
90S particles
RNase
ADP71_11290
Prokaryotic type
rRNA processing factors
ADP71_11290
Chromosome and associated proteins [BR:
vit03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ADP71_11290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
XopL_C
Lzipper-MIP1
Motif
Other DBs
NCBI-ProteinID:
AUZ04790
LinkDB
All DBs
Position
913373..914086
Genome browser
AA seq
237 aa
AA seq
DB search
MSLSVQRNQEIERLQKKLGYRFKRVELLHKALTHRSYGAKNNERLEFIGDSILNYTVAKM
LFLTFPDMTEGELSRLRANLVNQDTLADIATELNVGDCLFLGVGELKSGGFRRPSILADA
MEAMFAAVSFDANFDEAEHVVTLLFQNRIRNIDLRNHGKDAKTLLQEALQARRLPLPKYR
IEDQFGEAHEQTFVIVCDLGELGFQCKAQAHSRRLAEQAAAKEALNYVEKKCSFKRP
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtctgtgcaacgcaatcaagagattgagcgtttgcaaaaaaaattgggttac
cgttttaaacgagtggaattgttacataaggctttgacacatcgaagttatggagcgaaa
aacaatgaacgtttggagtttatcggtgattcaattttgaattatacggttgccaaaatg
ttatttttgacttttcctgacatgactgaaggcgagttgtcacgtttgcgtgccaatttg
gtcaatcaagacactttggctgatattgccactgagttgaatgtgggcgattgtttgttt
ttaggtgtgggtgaactgaaaagtggtggttttcgccgcccctcgattttagccgatgct
atggaagccatgtttgctgcagtcagctttgatgctaattttgatgaagcagaacatgtg
gtgacattgttgttccaaaatcgtatccgcaatattgatttgcgcaatcatggcaaagat
gccaaaactttattacaagaagctttacaagcacgccgcttgccattacctaaataccgc
attgaagaccaatttggtgaagcgcacgagcaaacgtttgtgatagtgtgtgatttgggt
gagttggggttccaatgtaaagcccaagcccatagccgtcgtttggcggaacaagcagct
gccaaagaagctcttaattatgttgaaaaaaaatgttcctttaaaaggccataa
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