Vitreoscilla sp. C1: ADP71_14860
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Entry
ADP71_14860 CDS
T05336
Name
(GenBank) porin OprD
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
vit
Vitreoscilla sp. C1
Pathway
vit01501
beta-Lactam resistance
vit02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ADP71_14860
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ADP71_14860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vit02000
]
ADP71_14860
01504 Antimicrobial resistance genes [BR:
vit01504
]
ADP71_14860
Transporters [BR:
vit02000
]
Other transporters
Pores ion channels [TC:
1
]
ADP71_14860
Antimicrobial resistance genes [BR:
vit01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
ADP71_14860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AUZ05082
LinkDB
All DBs
Position
complement(1178400..1179785)
Genome browser
AA seq
461 aa
AA seq
DB search
MTAWIPLWILLAVSYTAQGQESNNVDTTQAVNNTLIGENPFFSDAKVSVLNRHYYFNRDF
RDGGANPSGTNQFIPINQRHGYRDEWAHGLVVDAQSGYTSGVVGLGVDAQALIGIRLDSS
GAKTGTGLIPVGKDGQPSDTWSEVSGAVKAKVGETVVKYGTQMPNTPVLSVHNARLLPAT
SNGVSLESNDIDQLNLQAGWFTHVNAIDSTNHDDRFNTEYGLGIHAKRAGYLGATYKFTP
DTQASAYYGQLKDVWHQYYLQGNHTWRLNHGQFLKVNGVGYWNRSTGQALAGDIDSRLLG
ANVTYGNALHSITAGYQQVFGDEPLDVVGFRTIGGNANFANAGNVAIFNEANEKSWQLRY
DLNFKTLGVPGLTFTGRYIKGFDMDNRDSQNAMYRNALRGYTYKDGDSHWERDLELRYEF
QHGKAKGLNLRIRQATLRGSAGYRYGNMDEIRVIAEYPWSL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatggataccattatggattttattggcagtgtcttatactgcgcagggtcaa
gaatccaacaatgtggatactacacaagctgtaaataatacattgattggagaaaatcct
tttttttcggatgccaaagtgtcggttttgaatcgacattattattttaatcgtgatttt
cgtgatggtggtgctaatccatcgggtaccaatcaatttattcccatcaatcaacgccat
ggttatcgtgatgaatgggctcatggtttggtcgtagacgctcaatctggttatacatcg
ggggtggtgggcttgggtgtggatgcacaagcattaataggtattcgtttagacagctct
ggtgccaaaacaggtactggtttgattccggtgggaaaagatggacaaccgagcgacaca
tggagtgaagtcagcggtgctgtcaaagccaaagtgggtgaaacagtggtcaaatacggt
acgcaaatgcccaatacacccgtattgtcggtacacaatgcccgtttactgcctgcgaca
agcaatggcgtgtcgttggagagtaacgatattgatcaattgaacctacaagcgggttgg
tttacacatgtcaatgccatcgacagcaccaatcacgatgaccgttttaatactgaatat
ggtttgggtatccacgccaaacgggcgggttatttgggtgcaacatacaaattcaccccc
gatacccaagccagcgcgtattacggtcaattgaaagacgtatggcatcaatattatttg
caaggcaatcacacgtggcgtttgaatcatggtcagtttttgaaagtcaatggcgtgggt
tattggaatcgatcaacgggtcaagcgctcgcgggcgacattgacagtcgattattggga
gcgaatgtcacttatggcaatgcgttgcattcgattacagcgggttatcagcaagtgttt
ggtgatgaacctttggatgtggtgggttttcgtaccataggtggcaatgccaattttgcc
aatgcaggcaacgtggccattttcaatgaagccaatgaaaaatcatggcagctgcgctat
gacttgaatttcaaaaccttgggtgtgccgggattgacttttacaggacgctatatcaaa
ggttttgatatggacaatcgtgacagccaaaacgcgatgtatcgaaacgctttgcgtggc
tacacctacaaagacggtgacagccattgggagcgagatttggaattgcggtatgaattt
caacatggcaaagccaaaggcttgaatttgcgtattcgccaagcgactttgcgtggctca
gcaggctatcgttatggcaatatggatgaaattcgcgtcattgcagaatatccttggtct
ttatag
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