Vitreoscilla sp. C1: ADP71_14920
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Entry
ADP71_14920 CDS
T05336
Name
(GenBank) large subunit of exodeoxyribonuclease 7
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
vit
Vitreoscilla sp. C1
Pathway
vit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ADP71_14920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vit03400
]
ADP71_14920
Enzymes [BR:
vit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ADP71_14920
DNA repair and recombination proteins [BR:
vit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ADP71_14920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Ribosomal_S21
DHQ_synthase
Motif
Other DBs
NCBI-ProteinID:
AUZ05087
UniProt:
A0A2L0PLM2
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All DBs
Position
complement(1183126..1184478)
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AA seq
450 aa
AA seq
DB search
MSDHLFSPPPLAVSQLNALARQLLEQNLANVWVSGEISNLNHASSGHYYFSLKDQQAQVR
CALFKSYADRLTTPLREGEHIELTGKITLYEARGEFQINVTQLRSSGMGTLFEAYERLKQ
QLAQEGLFDEARKQELPAHPQTIGIVTSTATAALRDVVATLNRRMSALNIIVYPTPVQGK
SSHYQIAQAIATADARQEVDVLIVCRGGGSIEDLWAFNEEVVLRAIAECSIPVISGVGHE
TDVTLSDFAADVRAPTPTGAAEMVSPDAQAWRQYIASLHNVMHTALQRRYQDLSQRIDWY
ARQVKHPNERIATQRQQLRQQQQQLDYSMQNLLRQRTQYLQWQQAQLQAAAPSIKQWQQT
LQQQQQLLQQAWQQQWQNQHQRLKRQQVLLEALSPQQVLERGFSVIKNRRGKVITSADDL
KFGQHIDIVFHSSDAAAQVTRGSPQQGLFD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcatttgtttagcccgccaccgcttgccgtttcacaattgaacgctttggca
cgccaattattagaacaaaatctggccaatgtttgggtcagtggtgaaatttccaatttg
aaccatgccagcagcgggcattattatttttcgctcaaagaccaacaagcacaagtgcgt
tgcgctttgtttaaaagctatgccgatcgcttgaccacacctttgcgtgagggcgagcac
atcgaattgacaggtaaaatcactttatacgaagcccgtggcgagtttcaaatcaatgtc
actcagctgcggtcttcgggtatgggcactttgtttgaagcgtatgagcgtttgaaacag
caattggcgcaagaaggcttatttgacgaggcacgcaaacaagaattgcctgcgcatcca
caaaccattggtattgtgaccagtactgcgacagcggctttgcgcgatgtggtggcgact
ttgaatcgccgcatgagtgccttgaacatcatcgtgtatcccacaccagtacagggcaaa
agcagccattatcaaatcgcccaagccatcgccacagccgatgcgcgccaagaagtggat
gtgttgattgtgtgtcgtggtggtggcagcattgaagatttgtgggcatttaatgaagaa
gtggttttgcgtgcgattgctgagtgttcgattccggtgatttcaggtgtcgggcacgaa
accgatgtcactttgagtgattttgcagccgatgtgcgtgcacctacgcccacaggtgcg
gcagaaatggtcagcccagatgcgcaagcatggcgccaatacattgcgtctttacacaat
gtgatgcataccgctttgcaacgccgttaccaagatttgagccaacgcattgattggtat
gcgcgccaagtcaaacatcccaatgaacgcatcgcgacccagcgccaacaactgcgccaa
cagcagcaacaattggattacagcatgcaaaatttgctgcgccaacgcacacaatacttg
caatggcaacaagctcaattacaggccgctgctcctagcattaagcagtggcagcaaact
ttgcaacagcaacaacaattgttacaacaagcatggcaacaacaatggcaaaaccagcac
caacgcttgaaacgccagcaagttttactagaagcattgtcgccgcaacaagtcttagag
cgtggtttttctgtgattaaaaatcgtcgtggcaaagtcattacttctgctgatgatttg
aagtttggtcaacacattgatattgtgttccacagcagtgatgccgccgctcaagtgact
cgtggcagtccgcagcaaggtttatttgattaa
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