Vitreoscilla sp. C1: ADP71_24330
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Entry
ADP71_24330 CDS
T05336
Name
(GenBank) subunit beta of integration host factor
KO
K05788
integration host factor subunit beta
Organism
vit
Vitreoscilla sp. C1
Brite
KEGG Orthology (KO) [BR:
vit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vit03032
]
ADP71_24330
03036 Chromosome and associated proteins [BR:
vit03036
]
ADP71_24330
03400 DNA repair and recombination proteins [BR:
vit03400
]
ADP71_24330
DNA replication proteins [BR:
vit03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ADP71_24330
Chromosome and associated proteins [BR:
vit03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ADP71_24330
DNA repair and recombination proteins [BR:
vit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ADP71_24330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
NNH1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AUZ05779
LinkDB
All DBs
Position
complement(1843152..1843463)
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AA seq
103 aa
AA seq
DB search
MTKSELMLRLAELVSAQKGTQLVAKDVEHSVKVLVDTMTRSLAKGQRIEIRGFGSFDLNH
RPARVGRNPKTGDKVEVPEKYVPHFKPGKELRERVDQALQNCN
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctgagttaatgttacgcttggcagagttggtttctgctcaaaaagggact
caattggtcgctaaagatgtggagcatagtgttaaagtattggttgatacgatgacacgc
tcattggctaaaggccaacgcattgaaattcgcggcttcggtagttttgatttgaaccac
cgtcctgcacgagtaggtcgtaatcctaaaacaggcgataaagtggaagtacctgagaaa
tatgtaccacactttaaacctggtaaggaattgcgcgagcgcgtggaccaagccttgcaa
aattgtaattga
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