KEGG   Vitreoscilla sp. C1: ADP71_25050
Entry
ADP71_25050       CDS       T05336                                 
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
vit  Vitreoscilla sp. C1
Brite
KEGG Orthology (KO) [BR:vit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vit03021]
    ADP71_25050
Transcription machinery [BR:vit03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ADP71_25050
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 UCR_14kD HTH_31 RNase_J_b_CASP HTH_25 Ham1p_like
Other DBs
NCBI-ProteinID: AUZ05832
LinkDB
Position
1900255..1901115
AA seq 286 aa
MNPAFALPVPSGHSTLEQYIHTVNSIPLLSAEEEHDLAERHALYDDLEAAKKMILSHLRV
VVSIARGYDGYGLNQADLIQEGNIGLMKAVKRFEPSRGVRLFSFAVHWIKAEIHEFILRN
WRLVRVATTKPQRKLFFNLRSMRKNMNALSDIEAQQIADDLGVKLSEVFEMEQRMTGKDV
ALLSDSDDDEDSFAPIDWLTDHNSEPTQILAQKAHHQLQTEGLQTALAQLDDRSRHIVES
RWLQDDSGLTLHDLASQYGVSAERIRQIEAKALQKLRGFLGEVVPA
NT seq 861 nt   +upstreamnt  +downstreamnt
atgaacccagcttttgctttacctgtacccagcggtcattcaactttggaacagtatatt
cacacagtgaacagcattccattattgagcgcagaggaagagcatgacttggccgaacgt
catgctttgtatgatgatttagaagcggcaaaaaaaatgattttgtcgcatttacgtgtc
gttgtttctattgcacgaggctacgatggttatggtttaaaccaagcagatttgattcaa
gaaggcaatatcggtttgatgaaagccgtgaaacgcttcgagcctagccgtggtgtgcgt
ttgttttcattcgctgtgcattggatcaaagccgaaatccacgaattcattttgcgcaac
tggcgcttggtacgagtggcaactaccaagccacaacgcaaattgttcttcaatttgcgc
agcatgcgcaaaaatatgaatgctttgagcgacatcgaagcgcagcaaatcgccgacgat
ttgggcgtcaaattgtctgaggtgttcgagatggagcaacgcatgaccggcaaagatgtg
gccttgttatccgacagcgatgacgatgaagacagctttgcacccatagattggttgacc
gaccacaacagcgaaccgacacaaatcttggcgcaaaaagcccatcaccaattgcaaacc
gaaggcttgcaaactgccttggcacaattggatgaccgctcacgccacattgtcgaatct
cgttggttacaagacgatagcggcttaaccttacacgatttggccagccaatacggtgta
tctgccgaacgcattcgccaaatcgaagccaaagcattgcaaaaattgcgtggtttttta
ggcgaagtcgttccagcataa

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