KEGG   Vitreoscilla sp. C1: ADP71_27640
Entry
ADP71_27640       CDS       T05336                                 
Name
(GenBank) DNA polymerase 1
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
vit  Vitreoscilla sp. C1
Pathway
vit03030  DNA replication
vit03410  Base excision repair
vit03420  Nucleotide excision repair
vit03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ADP71_27640
   03410 Base excision repair
    ADP71_27640
   03420 Nucleotide excision repair
    ADP71_27640
   03440 Homologous recombination
    ADP71_27640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vit03032]
    ADP71_27640
   03400 DNA repair and recombination proteins [BR:vit03400]
    ADP71_27640
Enzymes [BR:vit01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ADP71_27640
DNA replication proteins [BR:vit03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ADP71_27640
DNA repair and recombination proteins [BR:vit03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     ADP71_27640
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ADP71_27640
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: AUZ06032
UniProt: A0A2L0PPG0
LinkDB
Position
2124382..2127174
AA seq 930 aa
MKTLLLIDGTSYIYRAFHAMAPLTSPTGEPTGALFGVLNMLKNLHIDYPHDYATCVFDAK
GPTFRNDMYPDYKATRPPMPDDLRPQIERIQELVADMGWPVLSIAGVEADDVIGSLAVKA
EAHGCKVIISTGDKDMAQLVTPNITCINTMNGDVLDEAGVVQKFGVRADQIIDYLTLVGD
KVDNVPGVDKVGPKTAAKWLAQYDTLDNIIAHATEFKGKVGEHLQAALSHLPLSKALITI
KTDMDFSEHLPNKIDDLLRQEPDWDKLVLRFAELGFKRWLAEAQKKANRTAPNHDAQNDL
FGDQSHSSNTTITPKIDIPDLGNHIETHYQAILSQADLASLLMRLQDALQHKQAIALDTE
TTSLNAMDAQLVGISIAFGAGDAVYIPLGHSMTAAPEQLPMDDTLSVLKPFLENPDLGKI
GQNIKYDQHILANYGILLQGVVADTMLLSYVLESHMGHGMDELAMRHLGMETVTYESLCG
KGAKQISFADVALDDAVRYAAEDADITWRLNAVMLPQLDEKQRHLYEAIELPVSQVLWQM
ERTGVLIDKKELDAQSHELGSQLWALEQQAYELAGQPFNLNSPKQLQEILFDKLGISTSG
LKKTASGGVSTNEAVLEKLAPDYPLPKLILQNRSLTKLKSTYTDKLPQLIRVDTGRVHTN
YAQAVAITGRLASNNPNLQNIPIRTAEGRRVRQAFIAPEGFQIMSADYSQVELRIMAHLS
GDETLIDAFEQGQDVHRRTAAEVFHVAPNEVTSEQRRYAKTINFGLIYGMGEYGLANNLE
ITPFEAKEFINRYFARYPAVAQYMQTAKDRAHEQGFVETEFGRRLYLPDINHKNGNIRAG
AERAAINAPMQGTASDLIKLAMIDVAAWLQQTDLRSRLIMQVHDELVLEVADEEMDLVKT
KLPELMANVGKLRVPLVAEVGIGANWDEAH
NT seq 2793 nt   +upstreamnt  +downstreamnt
atgaaaaccttgcttttgatagacggcacgtcttacatttaccgcgcatttcacgccatg
gcaccactgacttcgccaacaggcgagccaacaggtgctttgtttggcgtgttgaacatg
cttaaaaacctacacatcgactacccacacgattacgccacttgtgttttcgatgccaaa
ggtcccacatttcgcaacgatatgtatcccgattacaaagccactcgcccgcctatgcct
gacgatttgcgcccacaaatcgagcgcatccaagaattggtggcggacatgggttggcct
gttttaagcattgcaggcgtggaagcggacgatgtgattggctctttggcggtcaaagcc
gaagcgcatggctgcaaagtcatcatttccaccggtgacaaagacatggcgcaattagtg
acgcccaacatcacttgcatcaacaccatgaatggcgatgtactggatgaagcgggcgtg
gtgcaaaaatttggcgtgcgtgccgaccaaatcatcgattatttgaccctcgtaggcgac
aaagtcgacaacgtgcccggtgtggacaaagtcggtcccaaaaccgctgccaaatggttg
gcgcaatatgacactttagacaatatcatcgcgcacgctaccgaattcaaaggcaaagtg
ggcgagcatttacaggccgctttaagccatttgcctttgtccaaagccttaattaccatc
aaaaccgatatggactttagcgagcatttgcccaataaaatcgacgatttattgcgccaa
gaacctgattgggacaaattggtgctgcgttttgctgagctaggcttcaaacgatggctg
gccgaagcacagaaaaaagccaatcgaactgctccaaaccatgacgcacaaaatgatttg
tttggcgaccaaagccattcaagcaacacaaccatcacacccaaaatcgacattcccgat
ttgggcaaccacatcgaaacccattaccaagccattttgagccaagccgatttggccagc
ttgttaatgcgtttacaggatgctttacaacacaaacaagcgattgccttggacacagaa
accaccagtttgaacgccatggatgcgcaattggttggcatttccatcgcttttggcgca
ggcgatgcggtttatattcctctgggacacagcatgaccgctgcgccggaacaattgcca
atggatgacactttaagcgtcctgaaaccgtttttagaaaatcctgatttgggcaaaatc
ggtcaaaacatcaaatacgaccaacacattttggccaattacggcattttgttgcaaggc
gtggtggcggacaccatgttgttgtcgtacgtactcgaaagccacatgggtcacggcatg
gacgaattggcgatgcgccatttgggtatggaaacggtgacttacgaaagtttgtgtggc
aaaggtgccaagcaaatttcgtttgcggatgtggctttggacgatgcggtgcgctatgcc
gcagaagacgctgacatcacttggcgtttgaatgcggtgatgttgccgcaattggacgaa
aaacaacgccatttgtacgaagcaattgaattgcctgtctcgcaagttttgtggcaaatg
gagcgcacaggcgtcttgattgataaaaaagaattggatgcacaaagccatgaactaggc
agccagctttgggcgctcgagcaacaagcctacgaattggcaggtcaaccattcaatttg
aattcacccaaacaattgcaagaaattttgtttgataaattgggcatttccaccagcggt
ttgaaaaaaaccgcttcgggcggcgtatcgaccaatgaagcggtgttggaaaaattggca
cctgattatccattgccaaaattgattttgcaaaaccgcagcttaaccaagctcaaatcc
acttataccgataaattgccgcaattgattcgtgtcgatacaggacgtgtgcataccaat
tatgcccaagccgttgccattacaggacgcttagcgagcaacaatccgaatttgcaaaac
attccgattcgcaccgctgaaggtcgccgcgtgcgccaagcatttattgcaccagaaggc
tttcaaatcatgtcggccgactattcgcaagtggaactccgaatcatggcgcatttgtca
ggcgatgaaaccttgattgatgcgtttgaacaagggcaagacgtgcatcgtcgcactgct
gccgaagtgtttcatgtggcgccaaacgaggtcaccagcgaacaacgccgttatgccaaa
acgattaattttggtttgatttatggcatgggcgaatacggcttggcaaacaatttggaa
attacgccatttgaagccaaagaattcatcaaccgctatttcgcccgctaccctgctgtg
gcgcaatatatgcaaacggcaaaagaccgtgcgcatgaacaaggttttgtagaaaccgaa
tttggtcgccgcttatatttgcctgacatcaaccataaaaacggcaacattcgcgcaggc
gcagaacgtgccgccatcaacgcacccatgcaaggcaccgcttcagatttgattaaattg
gcaatgatagatgtggccgcttggctccaacaaacagatttgcgcagccgtttaatcatg
caagtacatgacgaattggtattggaagtggctgatgaagaaatggatttggtcaaaacc
aaattgcctgaattgatggcaaatgtaggcaaattgcgggtgccgttggtggcagaagtc
ggcattggtgccaattgggatgaagcccattaa

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