Vitreoscilla sp. C1: ADP71_29480
Help
Entry
ADP71_29480 CDS
T05336
Name
(GenBank) putative ribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vit
Vitreoscilla sp. C1
Brite
KEGG Orthology (KO) [BR:
vit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vit03016
]
ADP71_29480
Enzymes [BR:
vit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ADP71_29480
Transfer RNA biogenesis [BR:
vit03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ADP71_29480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AUZ06165
UniProt:
A0A2L0PPW0
LinkDB
All DBs
Position
2279336..2281225
Genome browser
AA seq
629 aa
AA seq
DB search
MNIFYEESGQFKLAHIVQKNDTTYQVDTQFGKRTKIKTNNVFLEFDGDMAQFMQQAEAHR
DDIDTDLLWEVCGDAELSAEDIAIDYFGGKPSKSQLAGTYLALYAAPAYFYKKAKGIFKA
APEETLKQALAAIERKKQQEAQMAAWSESLQAGQLPEAIAADIKTILYAPDKQTLTYKAF
QHACEQSKKNPLQLAQHIGAVTSIPQYLQDGFEFEYFKKGTGFPDMPVPANPLNLPINTT
IKAFSIDDAETTEVDDALSVQHLENGHTRIGIHIAAPSIAIQADDAMEKNIFQRLSTVYF
PGNKITMLPENWVQAFSLDEGKTVPALSIYFDVDEAWQVTSQETVLEQVDIQTNLRIQNI
EPLFNHEQGTDLTHDDQEAFAHHHDMVYLLQLAIELQKQRNKYDPTRAKQYDYSIVLNDD
DTVAISTRERGSPIDTLVSEMMILANSTWAKMLHENEYAGIFRVQPAGKVRFSTQSESHI
GMGVEHYAWCTSPLRRATDYFNQRQLLSIILPEQFTARFAMQSSDVFALMRDFDTTYGAY
ADFQRKMESYWSLVYIQQQDIRHLKATVLKEDLVRIEGLPLMGRAIGIPVCMPRSRAWLN
ITGIQLPQQHISLNFNKFIHSPEDEVQPV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttttacgaagagtctggccaattcaaacttgctcacatcgtccaaaaaaac
gataccacttatcaagtggatactcagtttggcaaacgtaccaagatcaagaccaacaat
gtgtttttagaatttgatggcgatatggcgcaattcatgcaacaagccgaagcccatcga
gatgacattgataccgacttattatgggaagtttgtggcgatgccgaattaagtgcagaa
gacattgcaatcgattattttggcggcaaacccagcaaatcacaattggcaggtacttat
ttggctttgtatgccgcacccgcttatttctacaaaaaagccaaaggcattttcaaagct
gcacctgaagaaactttaaaacaagctttggctgccattgaacgtaagaaacaacaagaa
gcacaaatggcagcatggtcggaaagcttacaggccggtcaattgccagaagccattgct
gcggatatcaaaaccattttatacgcgcctgacaaacaaaccctaacttacaaagctttc
caacacgcttgtgagcaaagcaaaaaaaatcctttgcaattggcgcaacatattggtgcg
gtcacatcgataccacaatatttgcaagatggttttgaatttgaatacttcaaaaaaggc
acaggttttccagacatgcccgtgcctgccaatcctctcaacttgcctattaacaccacc
atcaaagcgttttccattgatgatgcagaaaccaccgaagtggatgatgctttgtcagta
caacatttggaaaatggtcatacccgcatcggtattcatattgccgccccaagcattgcc
attcaagcggacgatgccatggaaaaaaatattttccaacgcctctcgacagtttatttt
cctggcaacaaaatcaccatgctgcctgaaaattgggtacaagcttttagcctagacgaa
ggcaaaacagtcccagctttgagcatttattttgatgttgatgaagcatggcaagtaact
agccaagaaaccgttttggaacaagtagatattcaaaccaatttgcgtattcaaaacatc
gaacctttattcaaccatgaacaaggcaccgatttaacccacgacgaccaagaagctttc
gcacaccaccatgacatggtgtatttgttgcaattggcgattgaattgcaaaaacaacgc
aataaatacgatccaacccgcgcgaaacaatacgattacagcattgtattaaacgatgat
gataccgttgccatttctacgcgcgaacgtggttctcctattgacactttggtgtctgaa
atgatgattttggccaacagtacttgggcaaaaatgttgcacgaaaacgaatatgcgggc
attttccgcgtacaacctgcaggtaaagtgcgttttagcacacaatctgaaagccatatc
ggcatgggtgttgagcattatgcatggtgtacctcgccattgcgtcgtgccacagattat
tttaaccaacgccaattgctcagtattattttacccgaacaatttacagctcgttttgcg
atgcaatcgagcgatgtgtttgctttgatgcgcgattttgataccacttacggtgcttat
gcagattttcagcgcaaaatggaaagttattggagcttggtatacatccagcaacaagac
attcgccatttaaaagccaccgttttaaaagaagatttggtacgcatcgaaggtttacca
ttgatgggtcgtgcaatcggcattcctgtttgtatgccacgttcacgagcatggttaaat
atcactggtattcaattaccacaacaacatatcagcttgaatttcaataaattcattcac
agtcccgaggatgaagtccaacctgtttaa
DBGET
integrated database retrieval system