Vitreoscilla sp. C1: ADP71_30460
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Entry
ADP71_30460 CDS
T05336
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vit
Vitreoscilla sp. C1
Pathway
vit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ADP71_30460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vit03019
]
ADP71_30460
03400 DNA repair and recombination proteins [BR:
vit03400
]
ADP71_30460
Enzymes [BR:
vit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ADP71_30460
Messenger RNA biogenesis [BR:
vit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ADP71_30460
DNA repair and recombination proteins [BR:
vit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ADP71_30460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
T4SS-DNA_transf
ResIII
Motif
Other DBs
NCBI-ProteinID:
QJQ52449
LinkDB
All DBs
Position
complement(2362402..2364234)
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AA seq
610 aa
AA seq
DB search
MNTHALQILHDTFGYQNFRGQQADIVECVATGNHAIVLMPTGGGKSLCYQIPALMRAGVT
IVVSPLIALMDDQVANLQAAGVAAAAVHSGIPSEKLHAIAHDIRQGVLKLLYVAPERLVS
ERFVRFMHSIDIGLFAIDEAHCVSQWGHDFRPEYQQLGFLAHEFPHIPRMALTATADEET
RADIRHYLQLQDAQTFVSSFDRPNIFYQVIEKNNGKKQLLQFIKSQGHQVSGIVYCLSRK
RVEEVALLLQENGFNAIPYHAGLDMAVRTRHQKQFSQEDNVIVVATVAFGMGIDKPDVRF
VAHLDMPKSIEHFYQESGRAGRDGLPAISWLCYGLNDWVLLRQRIQDGEASSMQKQIELQ
KVDAVLSLCETATCRRQLLLAQFDEVSEPCGHCDNCLETPVRFDATELVQKLLSCVYRLK
QNCATSYVIDVLRGKDSDWVRRLGHDKLSTFNIGADLSDKEWRSVVRQCVAGGLLSVNLS
HNQALQLTEASKAVLKGEQQLWLRPLKRDKKAVLSAPKTTVLRTERQERLWQALRTWRKA
RALADSVPAYVVFADRTLDSLVEHAPQNLAQLDGIYGLGSSKQAKYGQEIVDLCVNILQN
DVEPNTDILA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccacgccttacagattttacacgacacctttggctaccaaaatttccgtggt
caacaagccgacattgtcgaatgtgtggcaacaggaaaccatgccatcgtgttaatgcca
acaggtggcggcaaatctttgtgctaccaaatccctgctttaatgcgtgcaggtgtcacc
attgtggtgtcgccattgattgcgttaatggatgaccaagtcgccaatttacaggccgca
ggcgttgctgcggcagcggttcacagtggcattccctctgaaaaactgcatgccatcgct
cacgacatccgacaaggcgtcctgaaactgttatacgttgcgcctgaacgtttggtgagc
gagcgttttgtgcgttttatgcattctatcgatatcggtttgtttgccattgatgaagcg
cattgtgtcagccaatgggggcacgattttcgacctgaataccaacaattgggcttttta
gcccacgaattcccacacattcctcgcatggcgttaacggctaccgcagacgaagaaacc
cgtgccgacattcgccattatttacaattacaggacgctcaaacttttgtgtccagtttt
gaccgtcccaatattttttaccaagtcatcgaaaagaacaatggtaaaaaacaattgtta
caatttatcaaaagccaagggcatcaagtcagcggcattgtgtattgcctgtcacgcaaa
cgggtggaagaagtggctttgctattgcaagaaaatggtttcaatgccattccctaccac
gcaggtttggacatggctgttcgtacgcgccatcaaaaacaattcagccaagaagacaat
gtgattgtcgtggcgacggtggcgtttggtatgggcatagacaaacccgatgtgcgtttt
gtcgcacatttggacatgccaaaatccatcgaacatttttatcaagaatcaggacgggca
ggacgtgatgggctgccagcgatttcttggttgtgttatggcttaaacgattgggtattg
ctacgccaacgcatacaagacggcgaagccagctcaatgcaaaaacaaatcgaattacaa
aaagtcgatgcggtcttgtctttgtgcgaaaccgctacttgtcgccgccaattgttattg
gcccaatttgacgaagtttcagagccttgtggccattgtgacaattgtttggaaacgcct
gtgcgttttgatgcgaccgaattggtacaaaaattattgtcatgcgtttatcgcctcaaa
caaaattgtgccacttcctacgtcatcgatgttttacgaggcaaagacagcgattgggtg
cgccgcttaggtcatgacaaactgtctactttcaatattggtgcggacttaagcgacaaa
gaatggcgttcggttgtgcgccaatgcgtggcaggcggattgctcagcgtcaatctcagc
cacaaccaagctttgcaattgaccgaagcatccaaagccgtcctgaaaggcgaacaacaa
ttgtggttgcgcccactcaaacgggataaaaaagcggtattgtctgcgcctaaaaccact
gttttgcgcaccgaacgtcaagaacgtttgtggcaagccttgcgcacttggcgcaaagcg
cgtgcgctggcggacagcgtgcctgcttatgtggtttttgccgaccgtactttggacagt
ttggtggaacatgcaccacaaaatttggcgcaattggatggcatttatggtttgggtagc
agcaaacaagccaaatatggtcaagaaattgtcgatttgtgcgtcaacattttacaaaat
gatgtcgaacctaataccgatattttggcttga
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