Vitreoscilla sp. C1: ADP71_32780
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Entry
ADP71_32780 CDS
T05336
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vit
Vitreoscilla sp. C1
Brite
KEGG Orthology (KO) [BR:
vit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vit03032
]
ADP71_32780
03400 DNA repair and recombination proteins [BR:
vit03400
]
ADP71_32780
Enzymes [BR:
vit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ADP71_32780
DNA replication proteins [BR:
vit03032
]
Prokaryotic type
DNA Topoisomerases
ADP71_32780
DNA repair and recombination proteins [BR:
vit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ADP71_32780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Zn_ribbon_PADR1
Zn_ribbon_PaaD
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
AUZ06443
LinkDB
All DBs
Position
complement(2543511..2545829)
Genome browser
AA seq
772 aa
AA seq
DB search
MAKNLLIVESPSKAKTLKKYLGAEFEVLASYGHVRDLVPKSGAVDPENDFAMKYQLVSRN
SKHVDAIVQAAREVEHVYLATDPDREGEAISWHLQQILDGKRGLKTLPKERVVFHEVTKK
AVLEAIENPRPISQELVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC
ERENEIKAFTEQEYWSVHLDSHKGRSKFSARLTHYQNEKLDQFALPDEASQAQVIASLTG
NEAKIAKIEKKKRSRNPAAPFTTSTLQQEAVRKLGMTTDRTMRTAQQLYEGIDVGQGAIG
LISYMRTDSVSLSEDALVEIRHYIENKIDKQFLPSKANTYKTKSKNAQEAHESIRPTSVY
RTPEEVKPFLSSDQFRLYQMIWKRTVACQMTPAKFDLTSVDIEMGEGIFRTTGQVQTFAG
FLSVYEEDTDDDDDGEEGSKKLPEMNEGDVLPVDALRGEQHFTQPPPRYTEASLVKALEE
FGIGRPSTYASIISTLKDREYVTLDQKRFTPTDTGDIVNKFLTEHFGQYVDYNFTAKLED
QLDDIANGKRAWQPVMKSFWKDFDKQVKEKEDIPRAQITSEDLEEDCPKCGQHKLMIKFG
KRGRFIACHGYPECDYTRNVNETAEEAAKAAEEPTEVEGRFCPKCNGQLIYKKGRFGKFI
GCSNYKSKPKCTYIEPLEKKDSGVACPKCGKGHLIERKSRFGKLFYSCETYPDCDYAVWN
PPINEACPKCNWPLLTIKVTKRRGTEKVCPQKECGHAEQIEAPEAKKETNAE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaatttattaatcgtggaatcaccttccaaagccaaaacactgaaaaaatac
ttaggcgctgaatttgaagttttagcgtcttatggtcatgtgcgcgacttggttcccaaa
agcggcgcagtggatcctgaaaatgactttgcgatgaaataccaattggtcagtcgcaac
agcaaacacgttgatgccattgttcaagccgcgcgtgaagttgaacatgtgtatttggca
accgacccggaccgcgaaggtgaagccatttcttggcatttacaacaaattttagatggc
aaacgcggcctgaaaactttacccaaagagcgcgtggtctttcatgaggtcaccaaaaaa
gccgttttagaggccattgaaaatccacgcccgatttcacaagaattggtcgatgcccaa
caagcgcgacgtgctttggattatttggttggttttaatttatcaccattgttatggaaa
aaaatccgtcgtggtttgtcagcaggtcgtgtacaaagccctgctttacgcttaatttgc
gagcgcgaaaacgaaatcaaagcattcacggaacaagaatattggtctgttcatttggac
agccacaaaggtcgcagcaaattttcagcccgcttaacccattatcaaaatgaaaaatta
gaccaattcgctttgcccgatgaagcatctcaagcccaagtcattgccagcttgacaggt
aacgaagccaaaattgccaagattgaaaagaaaaaacgcagccgcaacccagccgcaccg
tttaccacttcaactttgcaacaagaagccgtacgcaaattgggtatgaccactgaccgt
accatgcgcactgcacaacaattgtacgaaggcatcgatgtcggtcaaggcgcgattggt
ttgatttcatacatgcgtactgactcagtcagtttgtctgaagatgctttggttgaaatt
cgccattacattgaaaacaaaatcgacaaacaatttttgccgagcaaagccaatacctac
aaaaccaaatcgaaaaatgcccaagaagcgcatgaatctatccgtcctacttcggtttac
aggacgcctgaagaagtgaaaccgtttttgagcagcgaccaattccgtttgtaccaaatg
atttggaaacgcacagtcgcatgtcaaatgacacctgcgaaattcgatttgacttcggtt
gacattgaaatgggtgaaggcatcttccgcaccacaggtcaagtgcaaaccttcgctggc
tttttgagcgtgtacgaagaagacactgatgacgatgacgatggcgaagaaggcagcaaa
aaattgccggaaatgaacgaaggcgacgttttgcccgtcgatgctttgcgtggcgaacaa
cactttactcaaccaccaccacgttacacggaagcgtctttggtgaaagctttggaagaa
tttggcatcggccgtccatcgacttacgccagtatcatttctacactcaaagaccgtgaa
tatgtcaccctagaccaaaagcgttttacgccaacggacacaggcgacattgtgaacaag
tttttaaccgagcattttggtcaatacgtcgattacaatttcaccgctaaactggaagac
caactcgacgatattgccaatggcaaacgcgcttggcaaccggtgatgaaatcattttgg
aaagactttgacaaacaagtcaaagaaaaagaagacattccgcgcgcacaaatcacctca
gaagatttggaagaagattgtccaaaatgtggtcaacacaaattgatgattaaatttggc
aaacgcggccgcttcatcgcttgccacggttatcctgaatgcgattacacccgcaacgtc
aacgaaaccgcggaagaagccgccaaagctgccgaagagccgaccgaagtagaaggccgc
ttttgtcccaaatgcaatggtcaattgatttacaaaaaaggtcgtttcggtaaattcatc
ggttgcagcaattacaaaagcaagcctaaatgtacttacatcgagcctttagagaaaaaa
gactcgggcgtcgcttgcccgaaatgtggcaaaggtcatttgattgagcgcaagagccgt
tttggcaaattgttttacagctgtgaaacctatccagattgcgattacgccgtttggaac
ccaccaatcaacgaagcttgtccaaaatgtaattggccattattgaccatcaaagtgacc
aagcgtcgtggcactgaaaaagtgtgtccacaaaaagagtgtggtcatgctgagcaaatc
gaagcaccagaggctaaaaaagaaaccaacgccgaataa
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