Vibrio sp. VB16: IUZ65_000100
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Entry
IUZ65_000100 CDS
T11571
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
viv Vibrio sp. VB16
Pathway
viv00071
Fatty acid degradation
viv00280
Valine, leucine and isoleucine degradation
viv00310
Lysine degradation
viv00362
Benzoate degradation
viv00380
Tryptophan metabolism
viv00640
Propanoate metabolism
viv00650
Butanoate metabolism
viv00907
Pinene, camphor and geraniol degradation
viv00930
Caprolactam degradation
viv01100
Metabolic pathways
viv01110
Biosynthesis of secondary metabolites
viv01120
Microbial metabolism in diverse environments
viv01200
Carbon metabolism
viv01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
viv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
IUZ65_000100 (fadB)
00650 Butanoate metabolism
IUZ65_000100 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
IUZ65_000100 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IUZ65_000100 (fadB)
00310 Lysine degradation
IUZ65_000100 (fadB)
00380 Tryptophan metabolism
IUZ65_000100 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
IUZ65_000100 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
IUZ65_000100 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
IUZ65_000100 (fadB)
00930 Caprolactam degradation
IUZ65_000100 (fadB)
Enzymes [BR:
viv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
IUZ65_000100 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
IUZ65_000100 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
IUZ65_000100 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
IUZ65_000100 (fadB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UGA54831
LinkDB
All DBs
Position
1:complement(22659..24830)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQATTLQVRELNDGIAELSFCAPASVNKLDLGTLESLDQALDALKNHSSLTGLILSSD
KDTFIVGADITEFLGLFAKPEEELDQWVQYANSIFNKLEDLPVPTLSMIKGYALGGGCEC
VLATDFRIGDKTTSIGLPETQLGIMPGFGGSVRMPRLVGADTAMELITTGKPKRAEDALK
IGLLDAVVDTDTLLESAINTITQAKNEQLDWQARRKQKTSALTLSKLEAMMSFTMAKGLV
IQKAGPHYPAPITSVVAIEEAATCSRNAALDIERKHFIKLAKSEEAKSLVGLFLNDQHIK
GIAKKAAKSANKKTERAAVLGAGIMGGGIAYQSALKGVPVMMKDIAQASLDLGMKEASKL
LNKQLLRGRIDGFKMTGILSSITPSLHYAGIEQSDIIVEAVVENPKIKAFVLSEVETYAS
EDSVIASNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEKTSEETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSALLKDGADFIKVDKVMEKKFGWPMGPAY
LLDVVGIDTAHHAQEVMAQGFPERMSKQGKDSIGALFEANKFGQKNGHGFYAYSVDKKGR
PKKSLSEDVLPLLESVCANKQAFDDDTIIQRMMIPMINEVVLCLEEGIIASPQEADMALV
YGLGFPPFRGGVFRYIDSIGAKHYVEMAAQYKALGPLYEVPQMLLDMAENDGVFYQAQQT
GSL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccactaccctacaggtaagagaattgaacgacggcattgccgagttg
agcttttgtgcacccgcctcagtgaacaaacttgatttaggaacgctagaatcactcgat
caagctcttgatgcccttaaaaatcactcaagcttaactggtctcattcttagttcagat
aaagatacttttattgtgggcgccgatattaccgagtttttaggtttgttcgctaaacca
gaagaagagctcgatcaatgggtgcagtatgcaaatagtattttcaacaaactagaagat
ctacccgtccccaccctttcaatgatcaagggttacgctctaggtggtggttgcgagtgc
gtattggctacagattttcgtattggtgacaaaaccacaagcataggtttaccagaaaca
cagctaggcattatgcctgggtttggtggatctgttcgtatgcctcgtttggttggtgct
gatacagcgatggagctcattactacaggcaagccaaaacgcgctgaagacgcgcttaaa
ataggtttgcttgatgcggttgttgatacagacacactactcgagtcggcaattaacacg
attactcaggcaaaaaatgaacaactcgattggcaggctcgccgtaaacaaaaaacctcc
gcgttaacactaagtaagctagaagccatgatgagttttacaatggcaaaaggcttagtc
atacaaaaggcgggaccacattatcctgcaccaataacctcggtggtagcaatagaagaa
gccgctacctgtagccgaaatgccgcattagatatagagcgtaaacactttatcaaactg
gcaaaatcggaagaagctaaatcccttgttggattatttttaaatgatcaacacataaaa
gggattgccaaaaaggccgcaaaatctgcaaataaaaaaacagaaagagcagcggtactt
ggcgctggtattatgggcggtggtatcgcttaccaatccgcgctcaagggcgtacccgtg
atgatgaaagatatcgctcaggcctcacttgatttgggtatgaaagaagcctctaagtta
ctaaacaaacaactattaagaggtcgtatcgacggtttcaagatgaccggtattctttct
tctattacaccgagtcttcattatgcgggcattgagcaatccgacattattgttgaagcc
gttgttgaaaaccctaaaattaaagccttcgtattgagcgaagttgaaacatacgcatca
gaagatagcgttatagcctccaatacatctacgatcccaatcaacctacttgccaaatca
cttaaacgcccagaaaacttctgtggtatgcatttctttaaccccgtccaccgtatgcca
ttggtagagattattcgtggtgaaaaaacatcagaagagacgattaatcgtgttgttgct
tatgcagcaaaaatgggtaagtcccctattgttgttaatgattgtccgggtttctttgtc
aaccgcgtactttttccatacttcggtgggtttagtgcactcctgaaagatggagcagac
ttcattaaagtagacaaagtgatggaaaagaaatttggctggccaatgggacccgcttat
ttgctcgatgtcgtgggaattgatactgcccatcatgcacaagaagttatggctcagggc
tttccagaaagaatgtcaaaacaaggcaaagattctattggtgctctttttgaagctaac
aaatttggccaaaagaatggtcatggtttctacgcatactctgtcgataaaaaaggtaga
cctaaaaaatcattatctgaagatgttttaccacttcttgaatctgtttgtgcaaataaa
caagcctttgatgatgacacgattatccaaagaatgatgattcctatgattaacgaagtc
gtgctttgcttagaagaaggcattattgcgtcaccacaagaagccgatatggccttggta
tatggtttaggtttccctccatttagaggtggtgtattccgctatatagacagtattggc
gcaaaacactatgttgaaatggcggcgcaatacaaagcattgggcccactctatgaagtc
cctcaaatgctattagatatggcagaaaacgatggcgtattctaccaagctcaacaaact
ggctcactttaa
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