Vibrio sp. VB16: IUZ65_000675
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Entry
IUZ65_000675 CDS
T11571
Name
(GenBank) RNA-binding transcriptional accessory protein
Organism
viv Vibrio sp. VB16
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
OB_PDCD11
T2SSK
HHH_6
RuvC
Motif
Other DBs
NCBI-ProteinID:
UGA54931
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All DBs
Position
1:complement(145630..147969)
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AA seq
779 aa
AA seq
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MSQTPSQQQRDSQHLSQQIAKELNVRTEQVAATIRLIDEGSTIPFIARYRKEVTGGLDDT
QLRTLDSRLSYLRELNERRVTILKSINDQEKLTSKLENDINQAESKTRLEDLYLPYKPKR
RTKGQIAIEAGLEPLALRLWKEAQGDPESEARRYINAEKGINDTKAALDGARFIIMEQIA
ENADLISKLRQYLTTQAEIVSRVIVGKEQEGQKFKDYFEHSEKLSKAPSHRALAMLRGRN
EGFLQLSMNADPNQDESIRRSYCEDIITNHYGLHLSDTPANKWRSQVISWAWRIKISTHM
ETELMGAMKERSEVDAIEVFASNLKDLLMAAPAGPKATLGLDPGLRTGSKIAVVDATGKV
LDTDTIYPNQPHKQIDKSAHVIEKLIRKHNVDLIAIGNGTASRETDDFVVNTLKKAHLST
QNIIVSEAGASVYSASELAANEFPNMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQY
QHDVGQNALAKRLNAVVEDCVNAVGVDVNTASTALLTRVAGLSNTIAENIVKYRDENGRF
ETRTTLKKVARLGPKAFEQCAGFLRIMDGKNPLDASSVHPEAYPLVKAVAEKNNKPIKAL
IGDTLFLRSLNAIDYTDSTFGVPTVTDIIKELDKPGRDPRPEFKTATFADGINAISDLEP
GMILEGVVSNVANFGAFVDIGVHQDGLVHISALTDRYVSDPREIVKAGDIVKVKVLEVDV
QRKRIALTMRLTDEPGQTNKPQTNRNASPERKNKPKSQGSQNQPMGNSAFADAFKKAGR
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaccccttctcagcaacaaagagactcacaacacttaagccaacagattgcg
aaagagcttaacgttcgaaccgagcaggttgcagcaacaattcgtcttatcgatgaagga
agtaccattcctttcattgcacgatatcgtaaagaggtaacgggtggcttggacgatacc
caactaagaaccctagattcgcgtttgagctatcttcgagagctgaatgaacgtcgagtg
actattcttaaatccatcaatgatcaagaaaaactaacgtctaagttagagaacgatatt
aatcaagcagagagcaaaactcgacttgaagatctttatcttccctataaacccaaaaga
agaaccaagggacagattgctatagaggcagggctagaaccattggcattgaggctatgg
aaagaagcacaaggtgatccagaatcagaagctcgacgctatattaatgctgaaaaagga
atcaatgatactaaagcggcgctggatggtgctcgttttattatcatggagcagattgct
gaaaatgccgatttaattagtaaacttagacaatacctcactactcaggcggagatcgta
tcccgagttatcgtaggaaaagaacaagagggacagaagtttaaagattatttcgaacac
agtgaaaaactaagtaaagcaccgtctcaccgtgcattagcaatgcttcgtggccgaaat
gaaggttttttgcagttatctatgaatgctgacccaaatcaagatgagagcattcgccgc
tcatattgcgaagatatcatcactaaccactacggacttcatctcagtgatacgccagca
aataaatggcgtagtcaggtaatcagctgggcgtggcgaatcaaaatttcgacccatatg
gaaaccgaattgatgggagcgatgaaggagcgcagcgaagtggatgcaatagaagtgttt
gcttctaacctaaaagacctattgatggcagctcctgcgggccctaaagcgacactgggt
ttagaccctgggcttcgaactggttctaaaattgctgtcgtagatgccacaggtaaagtg
cttgataccgacactatttacccaaaccagcctcacaaacagatcgataagtcagcccat
gtaattgaaaagctgatcagaaaacataacgtcgacctgattgcgattggaaatggtacc
gcttcccgcgaaactgatgattttgtagtaaatacattaaaaaaagcccatttaagtaca
caaaatattattgtcagtgaggcaggcgcatcggtgtattccgcatccgagctcgccgct
aacgaattccctaacatggacgtctctttacgtggtgccgtttctatcgcaagacgctta
caagatcctctggctgagttggttaagattgaccctaaatctattggcgttggccaatac
caacatgacgttggtcagaatgcattggcaaaacgattaaatgccgtagtagaagattgt
gtcaacgctgttggtgttgacgtcaatactgcctcaacagcacttcttactcgtgttgct
ggactttctaacactattgcagaaaatattgtcaaatatcgagatgaaaatggtcgcttt
gaaactcgaacaaccttaaaaaaggttgctcgtttggggcctaaagcctttgaacagtgt
gctggtttcttacgtattatggatggtaaaaatccattagatgcgtcttctgttcaccct
gaagcctatcctttggttaaagccgtcgcagagaaaaataataaaccaataaaagccctt
attggtgacacactatttttacgctctctcaatgcaatagactataccgacagtaccttt
ggggttcctacggtaaccgacattatcaaggagcttgataaaccgggtcgagaccctaga
ccggaattcaaaaccgcaactttcgccgacggaattaacgctatctcagatcttgaaccg
ggaatgattcttgaaggggtggtctctaacgtggcaaactttggtgcatttgtcgatatt
ggcgttcatcaggatggcttagtccatatctctgctttgaccgaccgttatgtctctgac
cctcgcgaaatcgttaaagctggtgacattgttaaagtcaaagtgcttgaggttgacgtt
cagcgcaagcgaattgcgttgactatgcgtctaaccgacgaacctggacagacgaacaaa
ccgcagacgaatcgaaatgcatccccagaacgtaagaacaaacccaaaagccaaggttct
caaaaccagccaatgggaaacagtgcgtttgcggacgcgttcaagaaagcaggacgatga
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