Vibrio sp. VB16: IUZ65_004325
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Entry
IUZ65_004325 CDS
T11571
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
viv Vibrio sp. VB16
Pathway
viv00020
Citrate cycle (TCA cycle)
viv00190
Oxidative phosphorylation
viv00650
Butanoate metabolism
viv00720
Other carbon fixation pathways
viv01100
Metabolic pathways
viv01110
Biosynthesis of secondary metabolites
viv01120
Microbial metabolism in diverse environments
viv01200
Carbon metabolism
Module
viv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
viv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
viv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IUZ65_004325 (sdhA)
00650 Butanoate metabolism
IUZ65_004325 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
IUZ65_004325 (sdhA)
00720 Other carbon fixation pathways
IUZ65_004325 (sdhA)
Enzymes [BR:
viv01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
IUZ65_004325 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
Thi4
FAD_binding_3
BEX
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
UGA55588
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Position
1:888124..889890
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AA seq
588 aa
AA seq
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MTIPVREFDAVVIGAGGAGMRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNS
HKDNWQWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELEKMGLPFSRFEDGSIYQRPFG
GQSIEFGGEQAARTAAAADRTGHALLHTLYQQNIKHKTTIFSEWYALDLVKNQDGAIMGC
TAICMETGEINYFKSKATILATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDIEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHIKLKLDHLGKDVLESRLPGICELSRTFAHVDPVKEPIPIIPTCHYMMGGV
PTQVSGQAIKQDANGADVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLG
ETLAAQSEARPATESDIEASLARTMRWENSNRGEDPVQIRKDLQACMQNNFSVFREGDAM
ATGLEELKVIRERLNDAHLTDKSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAH
ARFDFPDRDDEQWLCHSIYNPETEEMSKRDVNMEPVHREAFPPKVRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgactattccagttcgtgaatttgatgccgttgtcatcggtgctggtggcgcgggtatg
cgcgcagcattacaaatttctgagcaaggcctaagttgcgccttgctttccaaagtattt
ccaacccgttctcacaccgtatctgctcaaggtggtattaccgttgcgttaggtaattcc
cataaagataattggcagtggcatatgtacgacacggtaaaaggttctgattatatcggt
gatcagaatgctattgagtacatgtgcaaaaacggtcctgagtctgtaattgaacttgaa
aaaatgggtttaccattttctcggtttgaagatggttcaatctatcagcgcccatttggt
ggacagtctatagagtttggtggtgagcaagcggctcgtaccgccgccgcggcagaccgt
actggtcacgcgcttcttcatacgctttaccaacaaaatatcaaacataaaaccaccatt
ttctctgagtggtatgcattagatcttgttaagaatcaagatggggccatcatgggttgc
acagcaatctgtatggaaaccggcgagataaattatttcaaatctaaagcgactatttta
gcaacaggtggtgcaggtcgtatttatgcctctacaactaacgcacatatcaacactggt
gacggtgtcggcatggcgctacgcgcaggcgttccaatgcaagatatcgaaatgtggcaa
ttccacccaacaggtattgctggagccggtgtcttggttacggaaggttgtcgtggtgaa
ggtggctatcttctcaataaagatggcgagcgctttatggagcgttatgcaccaaatgcg
aaagatctggctggccgagacgtggtcgctcgttcaattatgattgagatccgtgaaggc
cgtggttgtgatggtccttggggtccacatattaaattgaaactagatcatttaggtaaa
gatgtactggaatcacgtttacctggtatctgtgagctatctcgtacctttgcccacgtt
gacccagtgaaagagccaatccctattattccaacctgtcactatatgatgggtggcgtg
ccgacacaggtttcaggtcaagcgattaaacaagacgcaaatggtgccgatgttgaggta
caaggcttgtttgcttgtggtgaaatagcttctgtgtctgtacacggtgcaaaccgtcta
ggtggtaactctctacttgatttggttgtatttggtcgagcaactggcctacatcttggt
gaaacgttggctgctcaatccgaagctcgcccagcaactgagtctgatatcgaggcttct
ttggcgcgcacaatgcgttgggaaaatagtaaccgtggtgaagaccctgttcaaattcgt
aaagaccttcaagcttgcatgcaaaataacttctcagtattccgagaaggcgatgcaatg
gcgacgggcttagaggaattgaaagttatccgtgaacgtctcaatgacgcacatctaacg
gacaaatcttcggaattcaatacacaacgtattgaatgtttagagttagacaacttgatg
gaaactgcattttctactgctgtagcggcaaattaccgtacagaaagccgtggagcacat
gctcgatttgatttccctgaccgtgatgatgagcagtggctatgccactctatctataat
ccagaaacggaagagatgtcaaagcgtgatgtgaacatggaacctgtgcatcgagaagcc
tttccacctaaagtacgtacttactaa
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