Vibrio sp. VB16: IUZ65_006940
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Entry
IUZ65_006940 CDS
T11571
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
viv Vibrio sp. VB16
Brite
KEGG Orthology (KO) [BR:
viv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
viv03032
]
IUZ65_006940 (gyrA)
03400 DNA repair and recombination proteins [BR:
viv03400
]
IUZ65_006940 (gyrA)
Enzymes [BR:
viv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IUZ65_006940 (gyrA)
DNA replication proteins [BR:
viv03032
]
Prokaryotic type
DNA Topoisomerases
IUZ65_006940 (gyrA)
DNA repair and recombination proteins [BR:
viv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IUZ65_006940 (gyrA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ApbA
Motif
Other DBs
NCBI-ProteinID:
UGA56076
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Position
1:1472212..1474872
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AA seq
886 aa
AA seq
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MSDLAKEITPINIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEFIPAVLPTKVPTLLVNGSSGIAVGMAT
NIPPHNLNEVIAGCLAFIDNEEITIEELMDFIPGPDFPTAALISGRKGIVEAYNTGRGKV
YMRSKAHIESEKNGKETIIVTEIPYQVNKARVIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVAEVVLNNLYSLTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREV
VTRRTIFELRKARDRAHILESLALALANIDEIIELIRNASTPAEAKAGLVARGWDLGNVA
GMLERAGTDAARPEWLEDQFGIRDGQYYLTEQQAQAILELRLHRLTGLEHEKILEEYKAL
LEEIAELMLILSSTDRLMEVIREELEIVRDNFGDERRTEIIAAVHDMDMEELIAQEDVVV
TLSHAGYVKYQILNDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILCFSTRGKAYR
LKVFQLPQASRNARGKPIVNILPLEENERITAILPVTEYSEDKFIFMATGDGTVKKTSLA
SFANVRSNGLIAVNLRDDDSLIGVDITDGNSDIMLFSKTGKVVRFKEELVRGMGRTAAGV
RGMKLVNGDQVVSLIVPANEGNILTVTQNGYGKQTSLEEYPTKGRATQGVVSIKVSERNG
QVIGAVQVVDGDEFMMITDAGTLVRTRVSEVNQVGRNTLGVTLIKTSEDENVVALQRIDE
IEEAEIEELEGEEIDPTNESESVTDTQDSEKSDDDIEDDADVDSEE
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctagctaaagagatcacgcccataaacattgaagatgagctgagaagttct
tacttagactacgcgatgtctgtcatcgttggtcgtgctcttcctgatgtgcgtgatggc
ctaaaaccagtacaccgccgcgttttattcgcgatgaatgtgcttggtaatgattggaac
aaagcatataaaaaatctgcccgtgttgtgggtgatgtaatcggtaaatatcaccctcac
ggtgatagtgctgtatacgacacgatagttcgtatggcacaaccgttttctttacgttac
atgctggtcgatggccagggtaactttggttctattgatggggactcagcagcagcgatg
cgttatacggaagtccgtatgtcgaagatcgctcatgaacttcttgctgaccttgataaa
gaaacagtagattacgtccctaactacgacggaacagaatttattccagcggttttacca
acgaaggtaccaacattgttggttaatggttcgtctggtattgcggttggtatggcgaca
aatatccctcctcataacttgaatgaggttattgctggttgcctagcgtttatcgataat
gaagaaatcactatcgaagagcttatggactttattccaggtcctgactttccaacggct
gctttaatcagtgggcgtaaagggatagtcgaagcttataataccggacgcggtaaagtt
tacatgcgttcaaaagcgcatatcgaatctgaaaagaacggtaaagaaacaatcattgtt
actgaaataccttatcaggttaataaggcgcgcgtaatcgaaaagattgccgagcttgtt
aaagataaaaaggtagaaggtatcagtgccctacgtgatgagtctgataaagacggcatg
cgtattgttatcgaatgtaagcgtgatgcggttgcggaagtggttttaaataacctctac
tcattgacacagcttcaaactacgttcggtatcaacatggtcgcgctagataacggccaa
cctaaactattcaaccttaaagaaatgttgaagtgttttgttgatcaccgtcgtgaggtt
gttacacgccgtactatcttcgaacttcgtaaagcgcgtgatcgtgcacatatcttagaa
agtcttgcgttagcactggcgaatatcgacgaaatcatcgaattgattcgtaacgcatcg
acgcctgcagaagcgaaagctggcttagttgctcgcggttgggaccttggtaatgttgcg
gggatgcttgaacgagctggtactgatgctgctcgtccagagtggctagaagaccagttt
ggtattcgtgatggccaatactatctaacagaacaacaagctcaagctattctagagctt
cgtttacacagattgactggtttagagcacgagaaaattcttgaagagtataaagcactt
cttgaagaaattgccgagttaatgcttattctttctagtactgatcgcttgatggaagtg
attcgtgaagagctagaaattgtccgtgacaattttggtgatgagcgtcgtacggaaatt
attgccgctgtccatgatatggatatggaagaactcattgcacaagaagatgttgtagtt
actttgtctcatgcaggttacgttaagtatcaaatcctgaatgactacgaagcacagcgt
cgaggtggtaagggtaagagcgcgactaagatgaaagacgaagattatatcgagcgtcta
ttagttgccaatactcacgacaacattctctgtttctctacgagaggcaaggcgtatcgc
ttgaaagtattccaacttcctcaagcaagtcgaaatgcacgtggtaaacctatcgttaat
attctgcctctagaagaaaacgaaagaatcacggctattttaccagtaacggaatactct
gaagataaatttatctttatggcgactggtgatggtacggtgaagaaaacatcattagca
agttttgctaatgtacgttcaaacggtcttatcgctgtgaacctgagagatgatgattct
cttattggtgttgatattaccgatggtaatagcgatatcatgctgttctctaaaacgggt
aaagtggttcgctttaaagaagaacttgttcgaggaatgggtcgtacagcggctggtgtt
cgcggtatgaagctggttaatggtgatcaagttgtttcgttaattgttcctgccaacgaa
ggtaatatattaacggtgacacaaaatggttacggtaaacaaacttcattagaagaatac
ccaacgaaaggtcgtgctacacaaggcgtggtttcgattaaggtttctgagcgtaacgga
caagttatcggtgctgtgcaggttgtagatggtgatgagtttatgatgatcaccgacgct
ggcacattggtacgtactcgtgtttctgaagttaatcaggttggacgtaatacactaggt
gtcacgctaatcaaaacgtctgaagatgaaaatgttgttgcactgcaaagaattgacgag
atagaggaagccgaaatagaagaattagaaggggaagaaattgacccaactaatgaatct
gaatcagtgactgatactcaagattctgaaaagagcgatgacgacattgaagatgatgct
gacgttgactctgaagagtaa
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