Vibrio sp. VB16: IUZ65_011285
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Entry
IUZ65_011285 CDS
T11571
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
viv Vibrio sp. VB16
Pathway
viv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
viv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IUZ65_011285 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
viv03400
]
IUZ65_011285 (uvrB)
DNA repair and recombination proteins [BR:
viv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IUZ65_011285 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IUZ65_011285 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
UGA53870
LinkDB
All DBs
Position
1:complement(2500573..2502603)
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AA seq
676 aa
AA seq
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MSKEYNLVSDYKPSGDQPTAIVKLLDGLENGLAHQTLLGVTGSGKTFTLANVIAQSKRPT
IILAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDSSINSHIE
QMRLSATKALLERKDAIIIASVSAIYGLGDPDSYLKMMLHVRRGDHLNQRDVIRRLAELQ
YTRNDVSFERGQFRVRGEVIDVFPAESDQEAVRIEMFDEEIECISLFDPLTGAINQRDLP
RFTVYPKTHYVTPREKILESIEHIKVELKSRKAYLLENNKLLEEQRISQRTQFDLEMMNE
LGFCSGIENYSRYLSGREEGEPPPTLFDYLPSDGLLVIDESHVTVSQIGAMFKGDRSRKE
TLVEFGFRLPSALDNRPLKFDEFEALAPQTIFVSATPGNYELEKSGSDIADQVVRPTGLL
DPVIEVRPVTTQVDDLLSEIRLRSVKSERVLVTTLTKRMAEDLTEYLHDHGVKVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNLEGRAILYGNSITKSMKKAMDETNRRRGKQQEHNEKNGIVPQALKKSIKDIMEI
GDIAKTRNQRVSKQVPLSKVAEPSQNYQAFTPQQLEKEIIKLEAAMYQHAQDLEFELAAE
KRDRIDKLRKQFIVNS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaatacaacctagtttccgattacaaaccgtctggggatcaacctaccgca
atagtaaagctattggatggtctggagaatgggcttgcacatcaaacattgttaggtgtc
actggctctggaaaaacgtttacgttggcgaatgtcatcgcacaatcaaagcgaccaacc
ataatccttgcgcctaataaaacacttgccgcgcagctttatggggaaatgaaagctttt
ttccctaataacgccgtagagtactttgtttcttattatgactactatcagcctgaggct
tatgtaccaacgacagatacctttattgaaaaagattcttcaataaattcacacatagaa
caaatgaggctatccgcgaccaaagcactcctagagcgaaaggatgccataatcattgcc
tctgtatctgcgatttatggtttaggtgaccccgattcgtatctaaaaatgatgctacat
gtaagacgcggagaccatttaaaccaacgcgatgttatacggcgactagccgaacttcaa
tacactcgaaatgacgtatcctttgaacgtggacagtttagggttcgaggtgaagtgata
gatgtcttccctgcagaatccgatcaagaagcggtacgaatagagatgttcgatgaagag
atagaatgtataagcctgtttgacccgctaacaggtgcaattaaccagagagacttgcct
agatttactgtctatccaaaaacgcactatgttactcctagagaaaaaatactagagtca
attgaacatataaaggtagaactaaagagtcgaaaggcctatttacttgagaataataaa
ttattagaagagcaacgaatctcccaaagaacgcagtttgatttggagatgatgaacgaa
ctcggattctgttcaggtattgaaaactactctagatacctcagtggtcgagaagaaggc
gagccgccaccgacgctttttgattatctacctagtgatggactgttggttatcgacgag
tctcacgtgaccgtttctcaaattggcgcaatgtttaaaggggatcggtcacgaaaagag
accttggttgagtttggctttcgtcttccttcagcgctagataataggccacttaagttt
gatgagtttgaagcattggctccgcagaccatatttgtatccgcgacaccgggtaattat
gagctcgaaaaatcaggaagcgatatcgcggatcaagtcgtgcgtcccactgggctttta
gacccagttattgaagtgcgtccagtgacaacgcaggttgatgatttattgtctgagatc
cgtttaaggtcagtaaaaagtgagcgagtcttagtgacgacactgacgaagagaatggcg
gaagatctgacagaatatcttcatgatcacggtgtaaaggttcggtacctgcattctgat
atcgataccgttgaacgggtggaaattattcgtgatttgagattaggcgaatttgatgtt
ctggtaggaattaacctattaagagaagggttggatatgccagaggtatctcttgtcgcc
attcttgacgcagacaaggaaggattcttaaggtcagaaagatcgctcattcagacgata
ggccgtgccgcaaggaacctagaaggaagagccattttatatggtaactccattaccaaa
tcaatgaaaaaggcaatggatgaaaccaaccgtcgtagggggaaacagcaagaacacaat
gaaaaaaatggcatcgtacctcaggctttgaaaaagagtatcaaagacattatggagatc
ggcgacatcgctaaaacccgtaatcaaagagtctcgaaacaagtccctttatcgaaagtt
gctgagccatcacaaaattatcaagcatttacaccacaacaattagagaaagagattatc
aaattggaagcggccatgtaccaacatgctcaagatttggaatttgaattagcggcagaa
aagagagatagaatagataagctaagaaaacagtttattgtaaacagctag
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