Vibrio sp. VB16: IUZ65_011735
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Entry
IUZ65_011735 CDS
T11571
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
viv Vibrio sp. VB16
Brite
KEGG Orthology (KO) [BR:
viv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
viv03016
]
IUZ65_011735 (truA)
Enzymes [BR:
viv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IUZ65_011735 (truA)
Transfer RNA biogenesis [BR:
viv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IUZ65_011735 (truA)
Prokaryotic type
IUZ65_011735 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
UGA53954
LinkDB
All DBs
Position
1:complement(2594810..2595604)
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AA seq
264 aa
AA seq
DB search
MRIALCVEYHGTKYSGWQRQKHVNSVQQELEKALSIVAAHPVEVQCAGRTDAGVHGTGQI
VHFDTSSTRKLVAWVMGTNTNMPKDIAVRWAKEVPDAFHARFTATARRYRYIIFNNAFRP
AILSSGVSHYHGELDAEKMHEAGQFLLGENDFSSFRAAHCQSNSPWRNIHHLNVSRNGNY
IVIDIKANAFVHHMVRNITGSLIEVGRGEQNTEWIKWLLAEKNRSLAGATAKPSGLYLVD
VDYPAEFELPRVAIGPLFLPDTSL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatagctttatgtgttgaatatcacggtacgaaatactctggttggcaaagacaa
aaacatgtcaacagtgtgcagcaagaattagaaaaagcgttatcgattgttgccgcacat
cccgttgaggttcaatgtgctggacgcactgatgctggcgttcatggcacagggcaaatc
gttcattttgatacaagttcgacgagaaaactggttgcgtgggtaatgggtaccaacacc
aatatgcccaaggacatcgcggttcgttgggcgaaagaggttccagatgcattccatgct
cgatttaccgctactgctcgacgttatcgctatatcatttttaataatgcgtttcgtccc
gccattctctcttccggagtcagtcactaccacggggagttagatgcggagaagatgcat
gaagcgggacaatttcttttgggtgagaatgactttagttcgtttcgcgcggcccattgt
caatctaacagcccatggcgaaacatccatcatttgaacgtatcgcgtaatggtaattac
attgttatcgatatcaaagcgaatgcatttgtacatcatatggttcgaaatattacgggt
agcttaattgaggttggccgcggcgaacagaatacagaatggataaaatggttacttgca
gagaaaaatcggtctttagccggtgcaacggcaaagccaagcggactgtatttggtcgat
gtggattatccagctgagtttgaacttcctagagttgccattgggccactttttttgcct
gatacatcactataa
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