Vibrio sp. VB16: IUZ65_012745
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Entry
IUZ65_012745 CDS
T11571
Name
(GenBank) serine hydrolase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
viv Vibrio sp. VB16
Pathway
viv00550
Peptidoglycan biosynthesis
viv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
viv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IUZ65_012745
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
viv01002
]
IUZ65_012745
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
viv01011
]
IUZ65_012745
Enzymes [BR:
viv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IUZ65_012745
Peptidases and inhibitors [BR:
viv01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
IUZ65_012745
Peptidoglycan biosynthesis and degradation proteins [BR:
viv01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
IUZ65_012745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
RL10P_insert
Motif
Other DBs
NCBI-ProteinID:
UGA54125
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Position
1:2794562..2795734
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AA seq
390 aa
AA seq
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MNKSKLTFKSLLLATAALSAPFSYSAPIVVPDAPQIAAKGYVLIDFNSGKVIAEKEKDTQ
LSPASLTKMMTSYVIGQELARGNISLQDEVVISKNAWAKNYPDSSKMFIEVGTTVKVEDL
NRGIIVQSGNDACVAMAEHVAGSEDAFVDLMNAWANSIGMSRTHFANVHGLDHNELYSTP
YDMALLGRALIRDVPEEYAIYSEKQFTFNGITQYNRNGLLWDKSMNVDGIKTGHTSKAGY
SLVSSATEGKMRLVAVVMGTKSENARKAESKKLLNYGFRFFETVAPHKAGETFVSERIWM
GSQENVALGVARDTFVTLPRGQAKNLKASFVLEKELTAPISQGDEVGKLYYQVDGEDIAE
YPLLALEDVDKGGVFSRLVDYFILLFKSWF
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcgaaacttacttttaaatcattgcttctcgcgacagctgcactatctgct
ccattttcatattcagcgcctattgtcgttcccgatgcgcctcagatagcggctaaaggc
tatgtgcttattgatttcaactctggaaaggttattgctgaaaaggaaaaagacacccag
ctttctcctgcaagtttaactaagatgatgaccagttatgttattggccaagaattagct
cgcggcaacatatcgttgcaagacgaggttgtcatcagtaaaaatgcgtgggctaaaaat
tatcctgattcatcgaaaatgtttatcgaagtaggcaccaccgttaaggttgaggatcta
aatcgaggtatcattgttcaatctggtaacgatgcctgtgttgcgatggctgaacacgtg
gcaggttctgaagacgcgttcgttgacctcatgaatgcgtgggccaattcaatcggcatg
tctcgtactcactttgccaatgttcacggcttggatcataacgaactctattcaacacct
tacgacatggcacttcttggtcgcgcgctaattcgtgatgtaccagaagagtatgcgatt
tatagcgaaaaacaatttacctttaatggcataacacagtacaaccgtaacggcttattg
tgggataaaagcatgaatgtggatggcattaaaacaggccacacaagcaaagctggatac
agcctagtcagctcagcaacagaaggtaaaatgcgccttgttgccgtagtaatgggaacg
aagagcgaaaatgcgcgtaaagcagaaagtaaaaaactgctcaattacggattccgtttc
tttgaaaccgttgctccacataaagcgggcgaaaccttcgttagtgagcgtatttggatg
ggttcacaagaaaacgttgccttaggtgttgcgagagatacttttgttactctacctcga
ggccaagctaagaacctaaaagcgagtttcgtgctagaaaaagaactcaccgcgccaatt
agccaaggtgatgaagttggaaagctttactatcaggtcgatggtgaagatatcgctgaa
tacccactacttgcactagaagatgtcgataaaggcggcgtctttagtcgtctagttgac
tactttatccttctttttaagagctggttctaa
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