Vibrio sp. VB16: IUZ65_015340
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Entry
IUZ65_015340 CDS
T11571
Symbol
crp
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
viv Vibrio sp. VB16
Pathway
viv02020
Two-component system
viv02024
Quorum sensing
viv05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
viv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IUZ65_015340 (crp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IUZ65_015340 (crp)
05111 Biofilm formation - Vibrio cholerae
IUZ65_015340 (crp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
viv03000
]
IUZ65_015340 (crp)
Transcription factors [BR:
viv03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
IUZ65_015340 (crp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
RepL
HTH_24
HTH_23
MarR
MarR_2
Sigma70_r4
HTH_11
HTH_ParB
Exonuc_VII_L
bAvd
HTH_28
RPA_C
HTH_7
HTH_36
Motif
Other DBs
NCBI-ProteinID:
UGA56475
LinkDB
All DBs
Position
1:3366564..3367196
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AA seq
210 aa
AA seq
DB search
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEM
ILSYLNQGDFIGELGLFEEDQERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQ
MASRLQTTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS
RETVGRILKMLEEQNLISAHGKTIVVYGTR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggttcttggtaaacctcaaaccgatccaacgttagagtggtttctttcgcattgtcat
attcataaatatccttccaaaagtacgcttatccacgctggagaaaaagcggaaactctg
tattacattgtgaaaggctctgtagctgtgcttatcaaggatgaagaaggtaaagagatg
attctttcttaccttaaccaaggagacttcatcggtgagctaggtctattcgaagaagat
caagagcgtactgcatgggttcgtgctaaatcaccatgtgaagtagctgaaatttcgttt
aagaaattccgccagcttattcaagttaatcctgacattttaatgcgtctttcagctcaa
atggcaagccgtctacaaacgactagtcaaaaagttggtgacttagcattcttagatgtg
acgggacgtattgctcaaacacttctgaacttagcaaaacaaccagatgcgatgactcat
ccagacggcatgcaaattaagatcactcgtcaagagattggtcagattgtaggttgttca
cgtgaaactgttggtcgtattcttaagatgcttgaagaacagaatttaatttctgctcac
ggtaaaactatcgtcgtttacggtacacgttaa
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