Vibrio sp. VB16: IUZ65_016175
Help
Entry
IUZ65_016175 CDS
T11571
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
viv Vibrio sp. VB16
Pathway
viv00300
Lysine biosynthesis
viv00470
D-Amino acid metabolism
viv01100
Metabolic pathways
viv01110
Biosynthesis of secondary metabolites
viv01120
Microbial metabolism in diverse environments
viv01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
viv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IUZ65_016175 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IUZ65_016175 (dapF)
Enzymes [BR:
viv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
IUZ65_016175 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UGA54739
LinkDB
All DBs
Position
1:3543686..3544516
Genome browser
AA seq
276 aa
AA seq
DB search
MHFHFSKMHGLGNDFMVVDCITQNIFFSPDLIRRLANRNTGVGFDQLLVVEAPYDPESDF
HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKFNINVSTKKGKMVLNIEEDDFVTVNM
GEPIFEPNKIPFKAKQAEKTYIIRVNEQTLFCGAVSMGNPHVVTPVDDIQTIDIETLGPL
LESYERFPERVNAGFMQIIDRGEINLRVYERGAGETLACGSGACAAVAVGIYQESLDEEV
KVHLPGGDLVIKWKGPGHPLYMTGPATHVFDGQLTC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcatttccatttctctaaaatgcacggtctgggcaacgactttatggtcgtagattgc
attacgcagaatattttcttttccccagatctcatccgtcgtttggcgaatcgaaacacc
ggtgttggcttcgaccaattactcgtcgttgaagcgccttatgatcctgaatccgatttt
cactaccgcatttttaatgctgacggtagtgaagtagaacagtgtggtaacggagcacga
tgctttgcacgatttgttcgaatgaaaggcctaaccaacaaattcaatattaacgtgagc
accaaaaaagggaaaatggtgttgaatattgaagaggatgactttgttaccgtgaatatg
ggcgaacccatatttgaacctaacaaaattccattcaaagctaaacaagctgagaaaacc
tacataattcgtgtcaacgaacagactctattttgtggtgcggtgagcatgggtaatcct
catgtcgtgacaccagttgatgatattcagaccattgatattgaaacactcggtcctcta
cttgaatcatatgaacgctttcctgagagagtgaatgctggctttatgcaaattatagat
agaggtgagataaaccttagagtctatgaaagaggcgctggagagaccttagcttgtggt
agcggagcttgtgcagcggtggctgtcggtatatatcaagaatccttagacgaagaagta
aaggtccatcttcccggcggagatcttgtcattaagtggaaaggaccgggacaccctctt
tatatgaccgggcctgctactcatgtatttgatggtcaattgacgtgctaa
DBGET
integrated database retrieval system
