Vibrio sp. J383: M4S28_01810
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Entry
M4S28_01810 CDS
T11471
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
viz Vibrio sp. J383
Pathway
viz03030
DNA replication
viz03410
Base excision repair
viz03420
Nucleotide excision repair
viz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
viz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M4S28_01810 (polA)
03410 Base excision repair
M4S28_01810 (polA)
03420 Nucleotide excision repair
M4S28_01810 (polA)
03440 Homologous recombination
M4S28_01810 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
viz03032
]
M4S28_01810 (polA)
03400 DNA repair and recombination proteins [BR:
viz03400
]
M4S28_01810 (polA)
Enzymes [BR:
viz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M4S28_01810 (polA)
DNA replication proteins [BR:
viz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M4S28_01810 (polA)
DNA repair and recombination proteins [BR:
viz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
M4S28_01810 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M4S28_01810 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UQV21752
LinkDB
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Position
1:387681..390494
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AA seq
937 aa
AA seq
DB search
MARIPDNPLILIDGSSYLYRAFHAYPGTMSNGDIPTNAVYGVVNMLRSMMRQFASDRIAV
IFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLISIPGVEADDVIGT
LASQASAMGMPVLISTGDKDMAQLVDDNVTLINTMTNVVMDREGVIEKFGIPPELIIDYL
ALMGDKVDNIPGIPGVGDKTATALLQGIGSIEKLYQNLDDIAALGFRGSKTMAKKLADNK
DNADMSYQLATIKLDVELEETPESLVKAQPNIDELIKLYGQLVFKSWLNELLEGGSGVVE
ADERSAATGSGAVRSSASAATSTVEMNTSAVTIDRSDYETILDEASFNVWLEKLKAAELF
AFDTETDSLDYMVANLVGLSFATEEGVAAYVPVAHDYLDAPQQLDRDWVLEQLKPILEDD
AQAKVGQNLKYDMSVLARYGIEMKGIKHDTMLASYVFNSVGGKHDMDSLALRFLQHSCIS
FEQIAGKGKKQLTFNQIELGEASPYAAEDADVTLRLHNRLMENIEQDEKLKTIYEEIEVP
LIPVMSRIERTGVFIDDMLLGAQSQEIAVRLDELEQKAYEIAEQEFNMNSPKQLQAILFE
KMGLPVIKKTPSGAPSTNEEVLQELALDYPLPKLIIEYRGLAKLKSTYTDKLPKMINAET
GRVHTSYHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFVAQHGWKILAVDYSQIELR
IMAHLSGDKALLEAFQQGKDIHAATAAEIIGVAIDQVTTEQRRRAKAVNFGLIYGMSAFG
LAKQLGIPRGEAQHYMDTYFERYPGVMQYMEDTRSAASEQGFVETIYGRRLHLPEIQSRN
GMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIQAEGDGRVKLLMQVHDELVFEVQES
ALAEIESKVQQLMESAADLEVPLVAEAGHGDNWDQAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtattcctgataatccattgattctgatcgatggctcttcttacctatatcgc
gcgttccatgcttaccctggcaccatgagcaatggtgatatcccaacgaatgctgtttat
ggtgtggttaacatgctacgcagcatgatgcgtcaatttgcttctgatcgtattgcggtt
atttttgatgcgaaagggaaaacgttccgtgatgatatgtacccagagtacaaagcaaac
cgcccacctatgcctgacgatcttcgttgccagatagaaccattgcacaatgtgattcgt
gcgatgggtttgccacttatctctattcctggcgttgaagcagatgacgtgattggtacg
ttggcttctcaagcttctgcgatgggtatgcctgtgcttattagtaccggtgataaagat
atggcgcagttggtcgatgacaacgttaccctgatcaacaccatgaccaacgtggtaatg
gatcgtgaaggtgttattgagaagtttggtattccgcctgagcttattatcgattatctc
gcgttgatgggcgataaagtggataacattccgggcattccaggtgttggcgataagact
gcgacggcattgttgcaaggtatcggtagtatcgaaaagttgtatcaaaatcttgatgat
attgcggcgcttggtttccgtggttcgaaaaccatggctaagaagctagctgataataaa
gacaatgctgatatgtcttaccagcttgcgacgattaagttagatgttgaacttgaagag
acaccagagtcacttgttaaagctcagccaaatatcgacgagctgatcaaactatacggc
caactggttttcaaatcttggttgaacgagctgcttgaaggtggcagtggtgtggttgag
gcggatgaaagatctgcagcaacgggatctggtgcggtacgcagcagtgcttctgcagca
acgtctaccgtggagatgaatacgtctgccgtgacaattgatcgcagtgactacgaaacg
attctagatgaagcgtcattcaatgtttggctagaaaagcttaaagcagctgaattgttt
gctttcgacactgaaacagacagcttagattacatggttgcgaacctcgttggcttgtca
ttcgcaaccgaagaaggcgttgccgcttacgtgccggttgctcatgattacctagatgca
ccgcagcagctggaccgtgattgggtacttgaacagcttaagccgattcttgaagatgat
gctcaagcaaaagtgggtcaaaacctgaagtatgatatgagtgtgctagcgcgctacggt
atcgagatgaagggcatcaaacacgacactatgttggcttcttacgttttcaatagcgta
ggtggcaagcacgacatggacagcctagcgctacgcttcctacagcatagctgcatctca
tttgagcaaatcgcaggtaaaggtaagaaacaacttactttcaaccagattgagctgggt
gaagcgtctccatacgccgcagaagatgctgacgtgacactacgtctgcataaccgcctg
atggaaaacatcgagcaagatgaaaagcttaaaaccatctatgaagaaatcgaagtacca
ctgattcctgtgatgtctcgcattgagcgtactggcgtattcatcgatgacatgctgcta
ggggctcaatcacaagagattgcggttcgtctggatgagttagagcagaaagcttacgag
attgcagagcaagagttcaacatgaactcgccaaaacagctgcaagcgatcctgtttgaa
aaaatgggtctaccggttatcaagaaaacgccatcaggtgcgccttcaactaacgaagaa
gtgttgcaagagctggcccttgattacccgttgcctaagctgatcattgagtatcgtggt
cttgcgaaactgaagtctacttacacggataaactgccgaagatgatcaacgctgaaacg
ggtcgcgttcatacttcttaccaccaagcggtaacggcaaccggtcgtttgtcttcgact
gatccaaacctacaaaatatcccaattcgtaatgaagagggtcgtcgtattcgccaagca
ttcgttgcacaacatggttggaagattctagcggtcgattactctcaaattgaattgcgt
atcatggcgcacctatcgggtgataaagcgctgctggaagcgttccaacaaggcaaagat
attcacgcggcaacggctgctgagattatcggcgtggctattgatcaagttaccactgaa
cagcgtcgtcgtgctaaagccgttaacttcggccttatctacggcatgagtgcctttggc
ttggctaagcaactgggtattcctcgtggtgaagcacagcactacatggacacttacttt
gaacgctaccctggtgtaatgcagtacatggaagacacacgcagcgcggcttcagagcaa
ggcttcgttgaaaccatttacggtcgtcgtttgcacctgccggaaatccaatctcgtaat
ggcatgcgtcgtaaagccgctgaacgtgcggcgatcaatgcgccaatgcaaggtacggca
gcagacatcattaagaaagcgatgctgttagtggatgaatggattcaagcggaaggcgat
ggtcgtgtgaagctattgatgcaagtacacgatgaattggtatttgaagttcaagagtca
gctttagccgaaattgaaagtaaagtacaacaattgatggagtcagccgctgatctagaa
gtaccgttagtcgcggaagcaggccacggtgacaactgggatcaagcccactaa
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