Vibrio sp. J383: M4S28_02425
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Entry
M4S28_02425 CDS
T11471
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
viz Vibrio sp. J383
Pathway
viz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
viz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M4S28_02425 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
viz03019
]
M4S28_02425 (groL)
03110 Chaperones and folding catalysts [BR:
viz03110
]
M4S28_02425 (groL)
03029 Mitochondrial biogenesis [BR:
viz03029
]
M4S28_02425 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
viz04147
]
M4S28_02425 (groL)
Enzymes [BR:
viz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
M4S28_02425 (groL)
Messenger RNA biogenesis [BR:
viz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
M4S28_02425 (groL)
Chaperones and folding catalysts [BR:
viz03110
]
Heat shock proteins
HSP60 / Chaperonin
M4S28_02425 (groL)
Mitochondrial biogenesis [BR:
viz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
M4S28_02425 (groL)
Exosome [BR:
viz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
M4S28_02425 (groL)
Exosomal proteins of other body fluids (saliva and urine)
M4S28_02425 (groL)
Exosomal proteins of breast cancer cells
M4S28_02425 (groL)
Exosomal proteins of colorectal cancer cells
M4S28_02425 (groL)
Exosomal proteins of bladder cancer cells
M4S28_02425 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UQV21872
LinkDB
All DBs
Position
1:525011..526657
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARIKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQSIIAEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKNLSVPCSDTKAIAQVGTISANSDSTVGNIIAEAMEKVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQEAGSVDLDSPFILLIDKKVSNIRELLPTLEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKSMLQDIAILTGGTV
ISEEIGLDLEKVTLEDLGQAKRITITKENSTIIDGAGNEEMIKGRVSQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKVAGLEGDNEEQNVGIRVALRAMEAPIRQITTNAGDEESVVANNVRAGEGNYGYNA
ATGEYGDMIAMGILDPTKVTRSALQFAASVAGLMITTEAMITDKPQDSGPAMPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgttaaatttggtaacgacgcacgtattaaaatgctagaaggtgta
aacgttctggctgacgcagtaaaagtaacgctaggtcctaaaggccgtaacgttgttcta
gacaaatcatttggcgcaccaacgatcactaaagatggtgtttcagttgcacgtgaaatc
gaacttgaagacaagttccaaaacatgggcgcacaaatggttaaagaagtggcttcgcaa
gcgaatgacgcggcgggcgacggaacaacaacagcaacagtattggctcagtctattatc
gctgaaggcctaaaagccgttgctgctggtatgaacccaatggatcttaagcgcggcatc
gacaaagcggttatcgcggctgttgaagagctgaagaacctttctgttccttgttcagac
acgaaagctatcgcgcaagtaggtactatctctgcgaactctgattcgacagtaggtaac
atcattgctgaagcgatggaaaaagtaggtcgtgatggtgtaatcacggttgaagaaggt
caggctctgcaagacgagctagacgtagttgaaggtatgcagttcgaccgcggttaccta
tctccttacttcatcaacaaccaagaagccggttctgttgatctagatagcccgttcatt
cttctaatcgacaagaaagtgtcgaacatccgtgaacttcttccgactctagaagcggtt
gctaaggcatctcgtccacttcttatcatcgctgaagatgtagaaggcgaagcgctagca
actcttgttgtgaacaacatgcgtggcatcgtgaaagtagcggctgttaaagcacctggt
ttcggcgaccgtcgtaaatctatgctgcaagacatcgcaatcctaacgggcggcacggtg
atctctgaagagatcggcttagaccttgagaaagtaacgctagaagacctaggtcaagct
aagcgcattacgatcactaaagaaaactcaaccatcatcgatggcgcgggtaatgaagag
atgatcaaaggtcgtgtttctcaaattcgtcaacaaatcgaagatgcaacttctgactac
gataaagaaaaacttcaagagcgcgtagctaagctagctggcggtgttgcagtaatcaaa
gttggcgcagcaactgaagttgagatgaaagagaagaaagaccgcgttgaagatgcactt
cacgcaactcgcgctgctgttgaagaaggtgtggttgctggtggtggtgttgcacttatc
cgcgctgcgtctaaagttgctggccttgaaggcgacaacgaagagcaaaacgtaggtatc
cgcgttgcactacgtgcaatggaagcgcctatccgtcaaatcacgacgaatgctggtgat
gaagaatctgttgttgctaacaacgttcgcgctggcgaaggtaactacggttacaacgca
gctactggcgaatacggcgacatgattgctatgggtatcctagatccaactaaggtaact
cgttctgcacttcagttcgcagcatccgttgctggtcttatgatcacaacagaagcgatg
atcactgataagccacaagactctggccctgcaatgcctgatatgggtggcatgggcggt
atgggtggcatgggcggcatgatgtaa
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