Vibrio sp. J383: M4S28_03705
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Entry
M4S28_03705 CDS
T11471
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
viz Vibrio sp. J383
Pathway
viz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
viz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M4S28_03705 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
viz03400
]
M4S28_03705 (ung)
Enzymes [BR:
viz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
M4S28_03705 (ung)
DNA repair and recombination proteins [BR:
viz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M4S28_03705 (ung)
Prokaryotic type
M4S28_03705 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UQV22088
LinkDB
All DBs
Position
1:822064..822744
Genome browser
AA seq
226 aa
AA seq
DB search
MSAPKSWESIINDERDKEYFQSVLAFVEQQRNSGKTVYPPQEQVFSAFDMTPFESVRVVI
LGQDPYHGAKQAHGLAFSVLPGVKIPPSLRNMYKELAQDIDGFEIPSHGYLDTWASQGVL
MLNTVLTVEEAKAHSHAKCGWETFTDTIIAELNQRSEPIIFLLWGAHAQKKGQAIDADKH
HVLVAPHPSPLSARRGFFGCQHFSMTNELLSSINQQPIDWTLPLAL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaccaaagagttgggaatccattattaatgatgaacgtgacaaagagtacttt
cagagtgttctcgcttttgtcgaacagcaacgtaatagtggaaaaaccgtctaccctcct
caagagcaagtgttcagtgctttcgatatgacgccttttgagtctgtacgcgtggttatc
cttgggcaagacccttatcacggcgctaagcaagctcacggtttagcattctctgtgcta
cctggcgttaaaattccaccgtctctacgtaatatgtacaaagaactcgcacaagatata
gacggctttgagatcccgagtcatggttacctcgacacttgggcatctcaaggggtgtta
atgttgaatacggtactgacagtagaagaggcaaaagcacactcacatgccaagtgtggt
tgggaaacctttaccgataccatcattgctgagctgaatcagcgttctgagccgatcatc
ttcttactgtggggcgcgcatgcccagaagaaaggccaagccattgatgcagacaaacat
catgtgttggttgcacctcatccatcgccattatcagcacgccgtggtttcttcggttgt
cagcatttctcgatgaccaacgaactactctcttctattaatcaacagcctatcgattgg
acattaccactggcactgtag
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