Vibrio sp. J383: M4S28_04605
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Entry
M4S28_04605 CDS
T11471
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
viz Vibrio sp. J383
Pathway
viz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
viz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M4S28_04605 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
viz03400
]
M4S28_04605 (recD)
Enzymes [BR:
viz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M4S28_04605 (recD)
DNA repair and recombination proteins [BR:
viz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M4S28_04605 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
NAT10_TcmA_helicase
Viral_helicase1
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
UvrD_C
DEAD
TrwB_AAD_bind
AAA_28
T2SSE
PhoH
CbiA
RNA_helicase
AAA
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
UQV22254
LinkDB
All DBs
Position
1:1033736..1035937
Genome browser
AA seq
733 aa
AA seq
DB search
MTTTTTNTSIETANSVKPVSLIPEQLMDVLKFLAEKGSIRQLDYQFARFIAQQATSHYQE
IGFLAGVVSHELGKGHICIQLAQATDLAPLLGLYGETALQLNQKLLGIDWVTVLQSSNLV
GTTNDCVKPLMFDGQRVYLQRYWNYEVVLAETLNRLSKPVEFNSEQKKALTKTLNQLFAR
SYHFLFNALAKAEANQQTSQVLRQQLVCDHLDIVDEQPLNWGAIDQAIVQAKQVTDLDVL
DGLVPLSACLNWQKVAAAVALSRRFAVISGGPGTGKTTTVTKLLSAMVEQSLSQGKTPTI
KLVAPTGKAAARLTESIGKAIEQLPLAPEVKANIPTESSTLHRLLGAIPNRAEFRHNRRN
PLHLDILVVDEASMVDLSMMYKLVDALPEHARLILLGDKDQLASVEAGAVLGDICSFNST
GYSTAQGNLIAEMTGFDAIANTRQVKAGSVNPPAIADSLCMLQKSYRFDARSGIGQLAKA
INNGSASQVDQVFAKGFDDIENHPLSSDSYNLMLRTLVNEYGGYLNRMNVPLEELETQES
RAKSVLDLFSQCRLLCSIREGDFGVKGLNHRIERALAARRLVNPHNDELWYHGRPVMVTR
NDHGLGLYNGDIGICMLEADSTTLESNSANSTPRLKVYFELPDGSVKAVLPSRVPEHETA
YAMTIHKSQGSEFDLTLMILPPDFSPILTRELIYTGITRAKKRLMMFSDTNVLKRGIKVK
TERVSGLGSRLTN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaacgaccactaataccagcatagaaacagcgaactctgttaagccagtttca
cttatccctgagcagttaatggatgtactcaagtttcttgcagaaaagggttcgattcgt
cagttggattatcagtttgctcgttttattgcgcagcaagcgacgagtcattatcaagag
atcggctttctagctggggtggtgagccatgaattaggcaaggggcatatttgtattcag
cttgctcaagcgacagaccttgctccgttgcttggcttatacggtgaaacggcactgcaa
ttgaaccaaaagctgttgggtattgattgggtgactgttctgcaatcatctaacctagtt
ggaacaaccaatgactgtgttaagccgctgatgtttgatggacagcgtgtctacttacag
cgttattggaactacgaagttgtgttggctgagaccttaaaccgtttaagtaagccagta
gagttcaattctgagcagaaaaaagcgctaaccaaaacgttgaatcagttattcgcacgc
agttaccattttctgtttaatgccttagccaaggctgaagcaaaccaacaaacgtctcag
gtattacgccagcaactggtgtgtgatcatcttgatatcgtcgatgagcaacctctgaat
tggggcgcgatagaccaagcgattgtccaagctaagcaggtaacggacttagatgtttta
gacggtttggtaccgctatcggcatgtttgaactggcaaaaagtagcggcagcggtggcg
ttaagtcgtcgcttcgcggtgatttctggtgggccgggtaccggtaaaacgaccacggta
actaagttgctttcggctatggtcgagcaatcactcagccaaggtaaaacaccgacgatc
aagctggtggcaccgacaggtaaagcggcagcacgtttaactgagtcgattggtaaagcg
attgaacaactgcctttagcacctgaagtgaaggccaacataccgacggaatcgagcact
ttgcaccgattacttggtgcgatccccaaccgtgccgagtttagacacaaccgacgcaat
ccacttcaccttgatatcttggtggtggacgaagcatcgatggtcgacttatcgatgatg
tataagctggtggatgcactccctgaacacgcaaggttgattctgcttggtgataaagat
cagctcgcttcagtagaagctggtgccgtgttgggtgatatctgctcgtttaattcaaca
ggctacagcacagcgcaaggcaatttgattgcggaaatgacaggctttgatgcgatagct
aatacaaggcaggtcaaagctggatcggtaaatccgcctgcgattgcagacagcttgtgt
atgctgcagaagagttatcgtttcgatgcgcgttcaggtatcgggcagttggcaaaagcg
atcaataacggctcggcgagtcaagtagaccaagtctttgcgaaagggtttgatgacatc
gaaaaccatcccctgtctagtgacagctataacttgatgctgcgaactttggtcaatgaa
tatggtggatatctcaatagaatgaatgtaccgcttgaagagctagagactcaagaatca
cgcgcaaaatcggttctcgacctgtttagccaatgtcgattgctgtgttctattcgtgaa
ggtgactttggtgttaaaggcctaaaccacagaatcgaaagggcacttgccgcaagacgc
ttggtgaatccgcacaacgatgaattgtggtatcacgggcgaccagtcatggtgacgcgt
aatgatcatggtttaggtttgtacaatggtgatattggtatctgtatgctcgaagccgat
tcaacgactttagagtcaaatagtgcgaattccacacctcgactgaaggtgtattttgag
ttgcccgatggcagtgtgaaagccgtactaccaagccgagtacccgagcatgagaccgct
tatgcgatgaccatacacaaatctcaaggcagtgaatttgatctgaccttgatgatctta
ccgccagacttcagccctattttaacgcgagagcttatctataccggtattacgcgtgct
aagaaacgactgatgatgttcagcgacacaaatgtgttgaagcgtgggattaaggtgaaa
acagagcgagtgagtggtttaggcagtcggttaacgaattag
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