Vibrio sp. J383: M4S28_12965
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Entry
M4S28_12965 CDS
T11471
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
viz Vibrio sp. J383
Pathway
viz00061
Fatty acid biosynthesis
viz00071
Fatty acid degradation
viz01100
Metabolic pathways
viz01212
Fatty acid metabolism
viz02024
Quorum sensing
viz04146
Peroxisome
Module
viz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
viz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
M4S28_12965 (fadD)
00071 Fatty acid degradation
M4S28_12965 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
M4S28_12965 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
M4S28_12965 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
viz01004
]
M4S28_12965 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
viz04147
]
M4S28_12965 (fadD)
Enzymes [BR:
viz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
M4S28_12965 (fadD)
Lipid biosynthesis proteins [BR:
viz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
M4S28_12965 (fadD)
Exosome [BR:
viz04147
]
Exosomal proteins
Exosomal proteins of breast milk
M4S28_12965 (fadD)
Exosomal proteins of breast cancer cells
M4S28_12965 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UQV20828
LinkDB
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Position
1:complement(2894301..2895995)
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AA seq
564 aa
AA seq
DB search
MDKPWLSRYPSDVPETINPDQYPSLIEMFEQSVQKYADQPAFENMGSIMTFRKLEERSRA
FAAYLQNDLKLKKGDRVALMMPNLLQYPIALFGVLRAGMIAVNVNPLYTPRELEHQLNDS
GAKAIVIVSNFASTLEKVVDKTPVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDL
PGAISFRKALHKGRRLQYVKPFMAGDDIAFLQYTGGTTGVAKGAILTHRNMIANVLQAKG
AYSPVLQEGRELVVTALPLYHVFALTVNCLLFVEMGGRNLLITNPRDIPGFIKELQKVPF
TAITGVNTLFNALVNNEDFHELDFSNMRLSVGGGMAVQRAVAEQWKKATGVHLLEGYGLT
ECAPLVTGNPYDLKDYTGAIGLPVPSTEVRIVDDEGKVVGNDQVGELQVRGPQVMQGYWQ
RPEATKEVIDQDGWLSTGDIVKFDDEGLLYIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAIGQPHEVSGELVKIYVVKRDPSLTKEDIIAHCREHLTGYKIPKLIEFREELPKT
NVGKILRRVLREENDAELAKRASE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtggacaaaccttggctttcacgttatccaagtgacgtaccagagacgatcaacccagat
cagtacccatctcttattgaaatgttcgaacagtcagtacagaagtacgcagaccaacca
gcattcgagaacatggggtctatcatgacattccgtaagcttgaagagcgcagtcgtgct
tttgctgcttacctgcagaatgatctaaaactgaagaaaggcgatcgtgtcgcgctgatg
atgccaaacctgctgcaatacccaattgcactctttggtgtactgcgtgcaggtatgatt
gcagtgaacgtcaacccactgtacacgcctcgtgaacttgaacatcaattgaatgactct
ggcgcaaaggcgattgttatcgtttctaactttgcgagcacgctagaaaaagtcgttgat
aaaacaccggttaaacacgttgtactaaccagccttgggcaaatgctgccaagagcaaaa
ggtacgattgtcgacttcgtagtgaaatacgtaaaaggcatggtgcctaagtacgatctg
ccgggtgctatctcatttcgaaaagcactgcataaaggccgtcgcctacagtatgtgaag
ccatttatggctggcgatgacatcgcattcctacagtacacgggtggcacaacgggcgta
gcgaaaggcgcaatcctaacgcaccgcaatatgattgcgaacgtactgcaagcgaaaggg
gcatatagccctgttctgcaagaaggccgtgaattggtggtaacggcattgccgctttac
catgtatttgctcttaccgtgaactgcttattgtttgttgagatgggtggccgtaacctt
ctgattactaaccctcgtgacattcctggctttattaaagagctgcaaaaggttccgttt
accgcgattactggcgtaaacaccttgttcaatgctctagtcaataacgaagatttccac
gagttggatttcagtaatatgcgtttatctgttggcggtggtatggcggttcaacgcgct
gttgctgagcaatggaagaaagcgacaggtgtccacctactggaaggctatggtttaacc
gagtgtgctcctttggtcacgggtaacccatatgatctgaaagattacacaggtgcaatc
ggcctaccagtaccatcgacagaagttcgtattgttgatgatgaaggtaaagtggttggc
aatgaccaagtgggtgaattgcaggttcgtggtcctcaagtgatgcaaggctactggcaa
cgtccagaagcgaccaaagaagtgatcgaccaagacggttggttatcgactggtgatatc
gttaagtttgatgacgaaggcttgttgtacatcgtagaccgtaagaaagacatgattcta
gtgtcgggcttcaacgtttacccgaacgagattgaagacgtagtggctctgcatggcaaa
gtgttagaagttgcggctatcggccaacctcatgaggtgtctggtgagctggttaagatt
tacgttgtaaaacgtgatcctagcctaaccaaagaagacattatcgcgcactgtcgtgaa
cacctaactggctacaagatccctaaattgattgagttccgtgaagaactaccaaaaacc
aatgtaggcaaaatcttgcgccgagtgcttcgtgaagaaaacgacgcagagcttgctaaa
cgcgcaagcgagtaa
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