Vibrio sp. J383: M4S28_13475
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Entry
M4S28_13475 CDS
T11471
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
viz Vibrio sp. J383
Pathway
viz03030
DNA replication
viz03430
Mismatch repair
viz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
viz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M4S28_13475 (dnaQ)
03430 Mismatch repair
M4S28_13475 (dnaQ)
03440 Homologous recombination
M4S28_13475 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
viz03032
]
M4S28_13475 (dnaQ)
03400 DNA repair and recombination proteins [BR:
viz03400
]
M4S28_13475 (dnaQ)
Enzymes [BR:
viz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M4S28_13475 (dnaQ)
DNA replication proteins [BR:
viz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M4S28_13475 (dnaQ)
DNA repair and recombination proteins [BR:
viz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M4S28_13475 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UQV20927
LinkDB
All DBs
Position
1:complement(3002786..3003553)
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AA seq
255 aa
AA seq
DB search
MNTSSTPEQNTNEKNSSDENKRIIVLDTETTGMNTEGGPHYMGHRIVEIGAVEIINRRLT
GRHFHVYIKPDRAIQEEAIGVHGITDEFLIDKPEYQDIHKEFLDFIKGAELVAHNAPFDT
GFMDYEFEKLNPAIGKTDDYCKVTDTLAMAKKIFPGKRNNLDILCDRYGIDNSHRTLHGA
LLDAEILADVYLLMTGGQTSLQFNAGQKEGEGESIRRAESGRKSLKVLRATADEVEAHQS
RLDLVEKSGSCLWRQ
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaataccagtagcactccagaacaaaacacgaacgaaaaaaacagttcggacgaaaat
aagcgcatcattgtactcgataccgaaaccacaggtatgaatacagaaggtggccctcac
tatatggggcatcgcatcgttgaaattggtgcggtagagatcatcaaccgtaggctgacc
gggcgtcacttccacgtctacatcaagcccgatcgtgcgattcaagaagaggcgattggc
gttcacggtattaccgatgaattcttgattgataagccagaataccaagacatacataaa
gagtttctcgactttatcaaaggtgctgagctggtagctcataacgcgcccttcgatacg
ggctttatggactatgaatttgagaagctcaaccctgcgataggtaaaacggatgactac
tgtaaagttaccgataccttggccatggcgaagaagatatttccaggcaaaagaaacaac
ctagatatcttatgtgatcgttacggtattgataactcgcaccgtaccctccacggcgca
ttgctcgatgcggagatcctagccgacgtctatttattgatgacgggtgggcaaacttcg
ctgcaatttaacgcaggccaaaaggaaggtgaaggtgaaagtatacgaagagcagaaagt
ggtcgaaaatccctaaaggttttacgagctacggccgatgaagtagaagcgcatcaaagt
cgtttagacctcgtcgagaaaagcggaagctgcctctggcgtcagtag
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