Vibrio sp. J383: M4S28_14335
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Entry
M4S28_14335 CDS
T11471
Name
(GenBank) EAL domain-containing protein
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
viz Vibrio sp. J383
Pathway
viz05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
viz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
M4S28_14335
Enzymes [BR:
viz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
M4S28_14335
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS_8
PAS
Motif
Other DBs
NCBI-ProteinID:
UQV21096
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All DBs
Position
1:3205404..3207443
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AA seq
679 aa
AA seq
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MPPQQLQHWFTQLTANSPFFFAVLDAQHNYFMVNERYCDIAGLSKTELAGMNDRQTLGEQ
FYQHLKPYYERAFNGETIEAEVTLNETNLDTSLHFSLSPLTNGNKTDYIVFHAFDTSENQ
VLARSLEESEAKFHKLSHLLPDGLLLVESDYILSSNPAAARLLGFNSTTELIGEELGRLF
IDEQTKTVFNNNLSSIISESGLVCLTGARCGFERKVQLNIDSTTILGSNTQLVLIQDAQE
TTKQYTPANSEDAYIDALTKLYNRVGFTKRLEQFIQNDTPVVMLYLDIDNFKNINDSLGH
HIGDKVIKEVASRLKRLLPRQAVIGHLGGDEFGIILPEPEHQRTPEMLAEKIISLINQPF
DLHHFSKRLACSIGSVSFPQDGTDARILLQNADTAMYEAKDRGRNRLIKFNEQMNKEARM
RLWLEIELQKALQQNGLEVWYQPKVNARDFTINGAEALVRWKHPVEGYISPAAFIPVAER
AGLIEQLGRVVMREVFATVKRWKMQGILPGRVAINLSPEQFGNPKLIDYVEKLLRSTELD
PSAITFELTESAVMSDSEHTLQMLNAIKKLGFALSIDDFGTGYSSLSYLARFPIDELKID
RAFISDIDTLPKQITVIENIINLGKSLDLTVVAEGVETSEQATLLSNLNCSSIQGFHFYR
PQPKQDVEELFAQNRRHKN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccagcaactacaacattggtttacccagctaacagcaaacagtccgttcttt
tttgcggtacttgacgcccaacataactattttatggttaatgagcgttactgcgatatt
gctggtttgagtaaaaccgagcttgctggcatgaatgaccgccaaacattaggtgagcaa
ttctaccaacaccttaagccttactatgagcgtgcattcaatggtgaaacgattgaggct
gaagtcactctcaacgaaactaacctcgataccagccttcatttcagtctatctccgctg
acgaatggcaacaaaaccgactacattgtctttcatgccttcgacacatcagaaaaccaa
gtacttgcccgttctttagaagaatccgaagcgaaattccacaagctatctcacctactc
cctgacggattactgttagttgaaagtgactacatcttgtcatcaaacccagcagcagca
cgcttgctcggctttaactccaccaccgagttaattggcgaagagttgggacgattattc
atcgatgaacaaaccaaaacagtcttcaataataacctgagttctattatttctgagtct
ggtttggtttgcttaacgggtgcccgatgcggatttgaacgtaaggttcaactcaacatc
gactccaccactattcttggaagtaacactcagcttgtgcttatccaagatgcacaagag
accacaaagcagtatacgcctgcaaacagtgaagatgcctacatcgatgcactgaccaag
ctctacaaccgagttgggttcaccaaacgtcttgagcagttcattcaaaacgatacgcca
gttgtgatgctctacttagatattgataactttaagaatatcaatgattcactaggtcat
catattggcgataaagtgattaaagaggttgcttcacgcctaaaacgtttactgcctcgt
caggccgttattggtcatttaggcggggatgagtttggtattatcctgccagaacctgaa
catcagcgaacgcctgaaatgctcgctgaaaagatcatttccctgatcaatcaacccttc
gatcttcaccactttagtaagcgcttagcctgctcgattggcagcgtgagctttcctcaa
gatggcaccgatgctcgtatcttgctgcaaaatgcagacaccgcaatgtatgaagccaaa
gatcgtggacgtaaccgcctgatcaagttcaacgaacagatgaacaaagaagcgcgtatg
cgattgtggttggagatagagctacaaaaagcactgcaacagaatggacttgaggtttgg
tatcaacctaaggtcaacgcgcgtgatttcaccatcaacggtgcagaagcgttagtgcgc
tggaagcacccagtagaaggctacatcagccctgccgcatttatccctgtagcggaacga
gctggccttattgaacaacttggccgagtggtgatgcgtgaagtatttgccacggttaag
cgctggaagatgcaaggtatcttgccaggtagagtggctattaacttgtctccagagcaa
tttggtaacccgaaactgattgattacgttgaaaagttacttcgttcaacagagcttgac
cctagtgctattacgtttgagctgacagaaagcgcggtgatgagtgatagtgaacacaca
cttcaaatgcttaacgctataaagaaactcggctttgctttatctatcgatgattttggt
acgggctactcttctctgtcttatttggctcgcttcccaattgatgagcttaagattgac
cgtgctttcatttctgatatcgatacgctaccaaagcaaatcactgtgattgaaaacatc
atcaacctaggtaaatctctcgatttaactgtagtggcagaaggcgtcgaaaccagtgaa
caagcgacgcttctatcaaacctcaactgtagttcaattcaaggcttccacttctatcgc
ccacaaccgaaacaagacgtcgaagagctgtttgcccaaaatcgtcgccataagaactag
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