Vibrio sp. J383: M4S28_14365
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Entry
M4S28_14365 CDS
T11471
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
viz Vibrio sp. J383
Pathway
viz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
viz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M4S28_14365 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
viz03019
]
M4S28_14365 (pnp)
03016 Transfer RNA biogenesis [BR:
viz03016
]
M4S28_14365 (pnp)
Enzymes [BR:
viz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
M4S28_14365 (pnp)
Messenger RNA biogenesis [BR:
viz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M4S28_14365 (pnp)
Transfer RNA biogenesis [BR:
viz03016
]
Prokaryotic type
tRNA degradation factors
M4S28_14365 (pnp)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UQV21102
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Position
1:complement(3212658..3214778)
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AA seq
706 aa
AA seq
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MFEKPVVKSFQYGNHTVTLETGVMARQATAAVMATMDDTSVFVSVVAKKEAVAGQDFFPL
TVNYQERTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPSAFKNEVQVIATVVS
INPDVNPDMITMIATSAALAISGAPFNGPIGAARVGHIDGELVLNPSNTELENSKLDLVV
SGTEGAVLMVESEADNLSEEEMLSAVVYGHDQQQVVIKAINEFAAEVATPSWNWEAPAVN
TELKAKVAEQAETRLSDAYQITEKMARYEQVGAIKSDTVEALIAQDENLDEREIRGMLGS
LEKNVVRSRIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQALVTATLGTQ
RDAQIIDSLMGEKKDNFLLHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIQAVMPSVD
EFPYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTNAGITALQMDIKIEGITKEIMQIALNQAQGARKHILSVMDE
AISGAREDISEFAPRIHTMKISSDKIKDVIGKGGAVIRALCEETGTTIEIEDDGTIKIAA
TEGAAAQEAIRRIEEITAEVEVGRIYQGKVARLADFGAFVTILPGKDGLVHISQIADKRV
EKVSDYLTEGQEVPVKVLEIDRQGRVRLSMKEAVEMPAEGEAPAAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaaaccagttgtaaaatcgttccagtacggtaaccacaccgttactctagaa
acgggcgtaatggcacgtcaagctactgctgctgtaatggcgactatggacgatacatca
gtattcgtttctgttgttgctaagaaagaagctgttgcaggccaagatttcttccctcta
acagttaactaccaagagcgtacatacgctgcgggtaaaatccctggtggtttcttcaag
cgtgaaggtcgtccttctgaaggcgaaacgctaacagctcgtctgattgaccgtccaatt
cgtccacttttcccaagtgcgtttaaaaacgaagttcaagttatcgctacggttgtttct
atcaaccctgacgtaaacccagacatgatcactatgatcgcaacgtctgctgcgcttgct
atctctggtgctccattcaatggtcctatcggtgctgcacgtgttggtcacatcgacggc
gaacttgttcttaacccatcaaatactgagcttgaaaactctaaactagacctagttgtg
tctggtacagaaggcgcagtactaatggttgaatctgaagcagataacctatctgaagaa
gaaatgctttcagctgttgtttacggtcacgaccaacaacaagttgtaatcaaagcaatc
aacgagtttgctgctgaagttgcaactccatcttggaactgggaagcgccagcagttaac
actgagcttaaagctaaagttgctgagcaagctgaaacacgtctatctgacgcgtaccag
atcactgagaaaatggcgcgttacgagcaagttggcgcaatcaagagcgacactgttgaa
gctctaattgcacaagacgaaaacctagatgagcgcgaaatccgcggcatgcttggttct
ctagagaaaaacgtagtacgtagccgcatcattgctggcaacccacgtatcgatggccgt
gaaaaagacatggttcgtgcgctagacgtacgtactggtgttcttccacgtacacacggt
tcttctctattcactcgtggtgaaactcaagcacttgttactgcaacgcttggtacacaa
cgtgatgctcaaatcatcgacagcctaatgggtgagaagaaagataacttccttctacac
tacaacttccctccatactgtgtaggtgaaactggtttcgttggttctcctaagcgtcgt
gaaattggtcacggtaagcttgctaaacgtggtatccaagcagtaatgccttctgttgac
gaattcccatacacagttcgtgttgtatcggaaatcacagaatctaacggttcttcttca
atggcttctgtatgtggtacatctctagcacttatggatgctggtgttccaatcaaagct
tctgttgcgggtatcgcaatgggtcttgttaaagaaggcgacgatttcgttgttctttct
gacatccttggcgacgaagatcacctaggtgacatggactttaaagtagcaggtactaac
gctggtatcactgcacttcaaatggacatcaagatcgaaggtatcactaaagagatcatg
caaattgctcttaaccaagcgcaaggtgcacgtaagcacatcctttctgtaatggatgaa
gctatctctggtgctcgtgaagatatctctgaattcgctccacgtatccacacaatgaaa
atcagctctgataagatcaaagatgttatcggtaaaggcggcgcagttatccgtgctctt
tgtgaagaaacaggtactacaatcgaaatcgaagacgatggcacaatcaagattgctgct
actgaaggcgcagctgctcaagaagctatccgtcgtatcgaagagatcactgctgaagtt
gaagttggccgcatttaccaaggtaaagttgctcgtctagctgacttcggtgcattcgtt
actatccttccaggtaaagatggtctagtacacatctctcaaatcgctgacaagcgtgtt
gagaaagtgtctgactacctaactgaaggtcaagaagttcctgttaaggttcttgaaatt
gaccgtcaaggccgtgtacgtctgagcatgaaagaagcagttgaaatgccagctgaaggc
gaagcacctgctgctgagtaa
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