Vibrio sp. J383: M4S28_19305
Help
Entry
M4S28_19305 CDS
T11471
Name
(GenBank) RHS repeat protein
Organism
viz Vibrio sp. J383
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
UQV24405
LinkDB
All DBs
Position
2:614934..618626
Genome browser
AA seq
1230 aa
AA seq
DB search
MSNWTSNAFNFDSFCSGGVDQRTRSYSYQILLGSLIGNWLKGPNLDISIQFSPYSTDNLG
FGKGWKLNLPRYDIENQQLYLANGQSYRAELNANIEMSIRYKKLLDFSVSSSANGYEITY
KNGRTDLLDKDGDIIKITQSNGHALYFSWLNVGQNKRLDKVWDDRTTKQTALLWVEYISV
GRVNIFTNIGSTHEAYFSLTLSNNKLVKCNLPEQAGSYSFGYESIGSYTLINEVNHPCGL
TERLRYKADGIRVNSMTYLPAVTALDVLTLNSPVITTTYDSVGTDSRNFMGYGVRGGELS
EGLDNLLERGFEYTYRVQKIENGSIVTAQTYNQFHLLVEEARQVSGDLVHLKRLEYPAID
NQQFSDQPAQYSLISKEEQIWFSGSDSQAQSRLWDYDEYGNMLKFVDENDIAERYEYYAK
NGEAGCPASPTGMVNFVKSRTLNNGSEQRVISYQYASLEGLNGHRDVVLSLEEDVQRYRS
HYAYQTDTGETYSFGRLASVQNDILHPNGTYSAVSHYRYELDSDVLEEHEELTCHDNTKT
NLAVGHYLDIGELARHVDSDGVSCAFTYDSLRRTTQERIEGSAARSYQYIVDTGMSRQTL
LLTDCKGNLCEQSWDGQGRELEAKVGSSVVWTKMYDALGRLQSKSTYDVLPDRHSRSAPV
VLTESYEYDEWDQVKATLLANGKRRVEFNNLASRKKTQGIEGLTMTVSSLNSWGLEEKKE
QGINSWNYEYDSWGRLIKETNPLARSKHYHYDRFDRVIRMTQANGVDQDITYAEHTDQSQ
VVDLKIGGVTLGQRDIDGLGRPRSLRRGASPQASLAWTYADSSNIPETETSMAAPTRLFA
RDSQLGVLSAKSSDGQASSYSHDPISGLPTGSQDSEGNQSTITYSTKGLPEAEVNDGQSR
YYSYSDGGVIAAIDSDTDTRQYGYDELGRLVKLSSNSTTVYYEYDEFDRVILETLISGSQ
TQVTELEWDEYSREVNRAIALNDNYIFEQSQEYNALGLLNSRKKECVTLGNLTEIYTYDD
LSQLTKVEFFGAGPLSDWSQPMTSIDWSYDELGNMLTQRTATTESEDFARYFYESDDPCQ
LTRITHSHPQLDGQVTVKYDLNGNMIEDADGRILEYDNFDRLQRVLADNAEWLYQYDSND
RLSTQQSASESRHFNYLWGDLASIEENGKLTQYIYHEGVPKWSEMDSETTLLATDQNGSV
IASNTSGKTGAMYRYSPYGQRDQAGNANEQ
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattggacttcaaacgcttttaactttgatagcttttgttcgggcggcgtagac
caaagaaccagaagctattcatatcaaatcttacttggctctcttattggtaactggctt
aagggaccaaacctcgatatatccattcaattctcaccttactcgacagacaaccttggt
ttcggtaaaggctggaaattgaatcttccaagatacgacatcgagaaccaacagctctat
cttgcaaatgggcaatcctaccgtgctgaattaaacgccaatatagagatgagtattcgt
tacaagaaactgctcgatttttcggtatcgtctagcgcgaatggttatgaaatcacctat
aaaaatggccgtactgatcttttagataaagatggcgatatcattaagatcactcaaagt
aatggtcatgctctctacttttcttggctcaacgtgggacaaaataagcgcttagataaa
gtttgggatgacagaacaaccaaacagaccgcacttttatgggttgagtatatctcggta
gggcgcgttaatatttttactaatattggcagtacccatgaagcttacttcagtcttact
cttagcaataacaagctcgtcaaatgcaatttaccagaacaagcaggtagctatagtttc
ggttatgaaagcattggttcatatacgttaatcaatgaggtaaaccatccttgtggcttg
accgagcgtttgagatataaggctgatggtattcgagtcaactcaatgacttacttacca
gccgttactgcactcgatgttcttacccttaattcgccagttattaccacaacctacgac
agtgttggtacagatagccgcaatttcatgggttacggtgtacgtggcggtgaattaagt
gaagggcttgataacttacttgagcgtggtttcgaatatacttatcgcgtacaaaaaatc
gaaaatggctctattgtcaccgctcaaacatacaatcaatttcacctactcgttgaagaa
gcccggcaggtaagcggagaccttgttcatttgaaaaggctggaatacccagcgattgat
aaccagcagttttcggatcaacctgctcagtattctttgatcagtaaagaggaacaaatc
tggttttctggatcggatagccaagctcaaagtcgattatgggattacgacgaatatggc
aacatgcttaagttcgttgatgagaatgacatcgcagaacgttacgaatactacgctaaa
aatggtgaggcaggttgtcccgcatcgccaacgggtatggtgaatttcgtcaaatctcgt
acgctcaacaatggttcagaacagagagtgatctcttatcaatatgcttctcttgagggg
ctgaatggccatcgtgatgtggttctgagtttggaagaagacgtccaacgctatagaagt
cattacgcttatcaaactgatactggtgagacttactctttcggccgattggcttcagtc
caaaatgacattcttcatcctaacggcacgtattctgctgtttctcactatcgctatgag
ttggatagcgatgtccttgaagaacacgaagagctgacctgtcacgacaatacgaaaacc
aatcttgcggttgggcactaccttgatattggagaactcgcgcgtcatgtcgattcagac
ggagttagctgtgcatttacttatgattcgcttcgtagaactactcaagaacggattgaa
ggaagtgcagcccgttcgtatcaatacattgttgatactggtatgagtcgacaaaccttg
ttgctaacggattgcaaaggcaacttgtgtgaacaaagctgggacggtcaaggacgtgaa
ttagaggctaaagttggtagctcggtcgtatggaccaaaatgtacgatgcgttgggcaga
ctccaaagcaagagtacctacgatgtgctgcctgatcgccattctagatctgcgcctgtg
gttttaacagaaagctatgaatacgatgagtgggatcaggttaaagcgactctgttagcg
aatggaaaacgtcgtgtcgagttcaataatcttgcctcacgtaagaaaacccaaggtatt
gaaggtttgaccatgacggtcagttctctgaatagctgggggctagaagagaaaaaagag
caaggcatcaacagttggaattatgagtacgactcatggggaagattgattaaagaaacg
aatcctctcgctcgatccaagcattaccattacgaccgttttgatcgtgtgattcgcatg
actcaagcgaacggtgtcgatcaagatatcacttacgctgaacataccgaccagtcacaa
gttgtagatctgaaaattggtggggtgactttagggcaacgcgatattgatggattggga
cggccgcgatccctgcgcagaggagcgagtccccaagcttcattggcgtggacttatgcg
gatagcagcaatatcccagaaactgaaaccagcatggcagccccaacaaggctatttgct
cgcgatagccaattgggagtgctaagtgctaagtcgtctgatgggcaagcttctagttac
agtcatgacccaatatccggcttaccgacagggagtcaggacagtgaaggcaatcaaagt
accattacctactcgacgaaaggcttacctgaagccgaggtgaatgatggtcagtctcgt
tattacagctactccgatggtggggttatcgctgcaattgatagtgacacggacactcgc
caatatggctacgacgaactcggacgattagtgaagttgagttcaaattcaacaacggtt
tactacgaatatgatgagtttgatcgagtgatattagaaacactgatatcgggtagtcaa
acccaagtcactgaactcgaatgggatgaatatagtcgcgaagtcaaccgagctatagcc
ttgaacgataattatatctttgagcaatcacaagaatataacgcgttagggctgcttaat
tctcgtaaaaaggagtgtgtaactttaggtaatctgacggaaatctatacctatgatgac
ctttctcagttgactaaagtcgagttcttcggcgcgggcccactgagcgattggtctcag
cctatgacgtctattgattggagctatgatgagctaggtaacatgctgacgcaacgcaca
gctactactgaatctgaggatttcgctcgttacttttatgagtcggatgacccttgccag
ttgactcgtattactcattcccacccacaactcgacggtcaggtaacagtgaaatacgac
ttgaatggcaacatgattgaagatgcggatggtcgaattcttgaatatgacaatttcgac
cgattacagcgtgtgttagctgataatgccgaatggctctatcaatatgacagcaacgac
cgactgtctacacaacagtccgcttctgaatctcgtcactttaactatctatggggtgac
ctcgcttcgatcgaggaaaatggcaaactcactcagtatatctatcacgaaggagtgcct
aaatggtcagagatggactcggaaaccacgttattggccacggatcaaaatggttcggta
atcgcatcaaatacgtcgggtaaaacaggggctatgtaccgttactctccatatgggcaa
cgtgatcaagcggggaatgcaaatgaacaataa
DBGET
integrated database retrieval system
