Vibrio sp. J383: M4S28_23310
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Entry
M4S28_23310 CDS
T11471
Name
(GenBank) EAL domain-containing protein
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
viz Vibrio sp. J383
Pathway
viz05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
viz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
M4S28_23310
Enzymes [BR:
viz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
M4S28_23310
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
DUF5547
IPT
Motif
Other DBs
NCBI-ProteinID:
UQV23453
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All DBs
Position
2:1547516..1549423
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AA seq
635 aa
AA seq
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MKKIKTIDLDIPDDMASNWQNIVDLLAQITEVPAALIMRVHTNYIEVFSTSHSENNPYNK
GDSETLGNGLYCETVMESQQQLVVPNALADPDWENNPDTKLGLISYCGIPLFWPNGELFG
TICILDSKENHYTPTYIKLLESFRTSIESQLKTLFQHAKLTQMNRDLKNRVYTRTKDLAS
LNYSLNQEIDKRRAAEQKINFQKNHDIGTGFLNRTAFESRLNNKLSSQQRLTDSSFAVIH
IGFTNGRRIQARYGYSALDQVLVEYRKRINSISDIEVLTARPTSIDLVLAFSVKDLHQRL
EELCQTLVKVGHSEFDIENDKVHLHAFIGIAITDNEDDAESILQKSSEAMLACKDSGQKF
AYYSQSHTEQQSHINKIEGYLLQAVRNDDLMLYFQPKVCPLTHRWVGAEALLRWRHPVLG
DISNETLIHMAEQNGLIFEVGSFVLRNAIEKAKEWSEYVEDFKMAVNVSAIQLKNVHFAE
QVVHLLETYHLEPHFLELEVTESGLIADEVVAKNTLESLHDIGVTLSLDDFGTGYASFSY
LKKFPFDTIKIDKSFIDQMLNSHEDSEIVRSIVQIAKKLDLKVTIEGIESEVQEQFIINE
GCDVGQGYLYGRPMPSQEFEHSLINQNYLGTTRYA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagataaaaacgatagacttagatatccctgacgatatggcctccaactggcag
aatattgtcgacctcttggctcaaatcactgaagtgcctgccgcacttatcatgcgtgtt
cacaccaactatattgaagtcttctctaccagtcacagtgagaataacccttacaacaaa
ggcgattctgaaaccttaggaaatgggctttactgcgaaacggtgatggagtctcagcaa
caacttgtggtgcccaatgcgcttgccgatcctgattgggaaaacaaccccgatacaaag
cttggcttaatctcttattgtggcattccgctattttggcctaacggcgaattgttcggc
accatttgtatcttggactcgaaagagaatcactatacgcctacctatatcaagctatta
gagagctttcgtacctcgatagagtcccagcttaaaaccttgtttcagcacgctaagctc
acccaaatgaatcgtgacttaaagaaccgggtctacactcgcactaaagatcttgcgagc
ctcaattattctttaaaccaagagattgataagcgaagagcggctgaacaaaagataaac
ttccaaaagaatcatgacatcggcaccggttttttgaaccgaaccgcattcgagtctcgc
ctaaataacaaactatcgtcacaacaaaggctgacggacagttcatttgcggttattcat
atagggtttacgaatggaaggcgcatacaggctcgatatggctatagtgccttagaccaa
gtactggttgaataccgaaaacgtatcaacagtatctctgatatcgaggtactaactgca
cgccctacttctatcgatctcgtactggcgttcagcgtaaaagatttgcaccaacgccta
gaagaactttgccagacgctcgttaaagtcggccattcagagttcgatatcgaaaatgac
aaagtacatttgcatgcctttatcgggattgcgattactgataacgaagacgatgcggaa
agcattctccagaaatcatcagaagccatgctcgcctgtaaagattccggacaaaaattc
gcttactactctcaatctcatactgaacaacaaagtcacatcaataagatcgaaggttat
ttgcttcaagctgtccgtaatgatgacctcatgctctactttcaacctaaggtatgtcca
ttaacgcatcgttgggttggtgctgaagccctactacgctggcgccatccagtattaggt
gatatctccaacgaaaccttgatacatatggccgagcaaaacggcttgattttcgaagtc
ggaagctttgttctgcgtaatgcgattgaaaaagcgaaagagtggtccgaatacgttgaa
gatttcaagatggctgtgaatgtgtctgcaattcaactcaagaatgtgcactttgcggaa
caagtggtacacctactcgaaacctatcacctagaaccccacttcttggaacttgaagtg
acagaaagtggcctgattgccgatgaagtggttgccaagaataccttagaatcgctgcat
gacattggcgttacattgtcactggatgactttggtacaggctacgcgtctttcagttat
ctcaagaaatttccgttcgacacgattaaaattgataagagcttcatcgatcagatgctt
aactcacacgaagactcggaaatcgttcgttctattgtccaaatcgcgaagaagctcgac
ctaaaagtcacaattgaaggcatagaatcggaagttcaggagcaatttattatcaacgag
ggctgcgatgtgggccaaggttacctttatgggcgcccaatgccgagccaagaattcgaa
cacagtttaatcaatcaaaactatttggggacaacccgttacgcttaa
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