Varroa jacobsoni: 111258654
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Entry
111258654 CDS
T07417
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
vja
Varroa jacobsoni
Pathway
vja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111258654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111258654
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111258654
mRNA degradation factors
5'-3' decay
Decapping complex
111258654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
Terpene_syn_C_2
CorA
DUF6441
Sey1_3HB
Motif
Other DBs
NCBI-GeneID:
111258654
NCBI-ProteinID:
XP_022685833
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MNGLDPNEATETLKNLLKVGQPPLPVASGEASCSDQMPPTGVTLLQQLFATAANAGSLNA
MEQLIELRGMAEGEAIPFGQKDVRIDVRVDKAEYLNNKVKIRNIVDLGWENKFTYGNQIA
EHCSRDYVAYTLKMASGVGGVRVINIKTNCRALIKGIQGQVADLAFAHIKSEVILAVVDD
LGNLYVYQIGDDGGISYFPLFQVNRHLATTGEPNRVIWCKYIPDDFEYVPQENDQENFSK
LLMVSHKNRCEFYYIDMIISRHGQSFKLDEGDFKVGCDVVAGNIPGAITEGSIAPEATTA
AVATSTGLTKFIKLNMTQDPDKRQLQSIHEWMPHQGPISSVFFLDDHQYIDPDARFWEYV
VTGADENRELKLWDCASWTCRQTIRFDGFGREVCLKARMDLSSNYIILSDLSNNVLYIIQ
IRKEVKNGTTVSASFASIAYFHLTFPVVSFAVSSVSRCKYKPMEEHVLNILERDDDDESK
KLEGILVELTWLTTKSLQQCKIIYRPLKDPEPALDLTTTATKLNSAVLLDSVVPKMIPNV
RSESDASSPSKEVADILQQTESEENGNTSPEGGVEGKNSPSDLVKACEKLQEQAQQAVQF
EPLPPSEKELTAHGFGTISINVEDITRELGDQLTRSLTNDVEASLVPALQTSIGKIGEDC
KLAFLTEARQTTRDAVNQVICPTFERISQKLFHDIASNLNVGFKQMLDKVEGHFEARGKE
RHDLNKKQLESALDSAISQMVKHMNKTMEQSIQQCIAQCRETVTTQVATEMAKQEKVLRT
VVREEVGKALQAERRSLMASPAGSLSSMDSNRNAGVLHEIKLLLSQGEVKKAFSRALSVS
DLDVLIQTLRMADRKSIFKRDRCPLTPQVLVALIQQLSADISTHTQLKLDYLEDAMMTLD
AREEVTKQLLLRILPSFVESLKNFLRSYPQHADHRRVERLRSMAELYTDRVSSGY
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaacggactagatcctaacgaagcgacagaaacactaaagaacctgctaaaggttggc
cagccgccgttgccagtggcaagcggagaggcaagctgttccgatcaaatgccaccgact
ggtgtaacgcttctccagcagttgtttgctacggcagctaacgccggcagtctgaacgcc
atggaacagctaattgaattgagaggaatggccgaaggcgaggcgattccattcggacag
aaagatgtccgaatcgatgttcgagttgacaaagctgaatacttgaacaacaaggtcaag
attcgaaatattgttgacctcggctgggagaacaaattcacctatggcaaccagatcgca
gagcattgcagccgtgactatgttgcatacaccctcaaaatggcgtcgggtgtgggcggt
gttcgtgtcattaatattaagacgaattgccgggcgcttattaaaggaattcaaggccag
gtggctgatctagcattcgcacacatcaaatctgaagtcattcttgctgtcgtagacgac
cttgggaacttatacgtttatcagatcggagatgatggaggcatcagctattttccgtta
tttcaggtcaatcgacatttagccacgactggagaaccaaatcgggtcatttggtgcaag
tatattccggatgattttgagtacgtccctcaagaaaacgatcaggagaatttttccaag
ctcttgatggtgtcgcataagaaccgttgcgagttctattatattgatatgataatttcc
cgccatgggcaaagctttaaactggacgagggcgactttaaagtaggttgtgatgtggta
gctggtaatattcctggagctattacagaaggttctatagcgccggaggccacaaccgct
gccgtggctacttctaccggtttaaccaaatttataaaactcaacatgacacaagatccg
gacaagcggcagctccaatcaatccatgagtggatgccgcatcaaggaccgattagttcc
gttttctttctagatgaccaccaatatattgaccccgatgcccgtttctgggagtatgtc
gtcacgggagcagacgaaaatcgcgaattaaaactatgggattgtgcctcttggacatgt
cgacaaacgattcgatttgacggcttcggccgtgaggtatgccttaaagcacgaatggac
ttatcatctaactatatcatcctgtccgaccttagtaataacgtcctctatataatccag
atccgcaaggaagtgaagaatggaacaacagtatctgcgtcatttgcctcgatcgcctac
ttccatttgacttttcctgtagtgagcttcgctgtcagctctgtttcccgctgcaagtat
aagccgatggaagagcatgtcttgaatattctcgagcgtgacgatgacgacgaatcgaag
aagctcgaggggattcttgtcgaacttacttggttgacgacaaagtcattgcaacagtgc
aagattatctatcggccgcttaaggatcccgagccggcgttagaccttaccacgacagct
accaaattaaattcggcggtattacttgacagcgtcgtgccaaagatgattcccaacgtt
cgctcggaaagcgacgcgtcgtcaccaagtaaggaggtggcagacattttgcagcaaaca
gaatcagaagaaaacggcaacacatcgccagaaggcggcgttgaagggaagaactcgcct
agcgacctcgtcaaagcgtgcgagaaacttcaggaacaggcacaacaggctgtgcagttt
gagccgttacccccttcggagaaagaactgacggcgcacggcttcggtacgataagcatc
aacgtggaggatatcacccgcgagctgggcgaccaattgactcgcagtctcacaaacgat
gtggaagcctcgctcgtgcccgcgttacaaacgtcaattggcaagatcggcgaagattgc
aagctcgcattcctcaccgaggcacgccaaaccactcgcgacgcggtcaatcaggtgatc
tgccccacatttgaacgcatctcgcaaaagcttttccacgatatcgccagcaacttgaat
gtgggcttcaaacagatgcttgacaaagttgagggtcatttcgaggccagaggcaaggag
agacacgatctaaacaagaaacagctcgaatcggcgttagattcagccatcagtcaaatg
gtgaagcatatgaataagacgatggagcagtcgattcaacagtgcattgcccaatgccgt
gaaactgttacaacgcaggttgctactgaaatggcgaagcaggaaaaagttcttcggacg
gtggtgcgcgaggaggttggcaaggcgctgcaggcggagcggaggtcgcttatggccagc
cctgcggggagtctgagctcgatggactcgaaccgcaatgctggtgtgttgcacgagatc
aagttgctgctctcacagggcgaggtaaagaaagcgttctcccgagcgctttccgtaagt
gatctggacgtccttatccagacgctgcgcatggccgaccgaaaaagtatttttaaacgg
gatcgttgtcctctcacaccacaggttctagtggcattgattcaacaactgtctgctgac
atttctacgcacacccagttgaaactggattacttagaagatgctatgatgacactggat
gcccgagaggaggtgacaaaacagctactcctccggatcctaccgtcgtttgttgagtcg
ctcaagaacttcctgcgcagttatccccagcatgcggaccatcgtcgagtggagcggctt
cgtagtatggcagaactgtacacagaccgggtgtcgtctggttattag
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