Varroa jacobsoni: 111258663
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Entry
111258663 CDS
T07417
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase-like isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vja01009
]
111258663
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vja03021
]
111258663
Enzymes [BR:
vja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111258663
Protein phosphatases and associated proteins [BR:
vja01009
]
HAD phosphatases
Fcp/Scp phosphatases
111258663
Transcription machinery [BR:
vja03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111258663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
FCP1_C
LIG3_BRCT
Biotin_lipoyl_2
Motif
Other DBs
NCBI-GeneID:
111258663
NCBI-ProteinID:
XP_022685853
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MEPATASVELNGDRLFLKTQGPIKVLRLKVKPEFRLYKGFCLLTFEESQALTPSGPRPRS
LNLKCPFEGIVSRVLVSAGAVIENGSVLLELKRCAHPIVMKDLCAECGADLRELEAGEAG
DASVSMIHAIPELRINEQLSQSIGKADEQRLLGLRKLVLLVDLDQTLVHTTSEMIHPKLK
GVEHFTLPGNRQLWYHTRIRPGTERFLEKISRLFELHIVTFGARPYAHHIASLLDKQKKY
FQFRILSRDECFHPASKTANLRSLFPCGDQLVAIIDDREDVWNFAANLVTVKPYVFFRGA
GDINAPIGGLAEFHSLPPSDGGSCSAFLSPRNPVVIHSDRDVVACLRDLIEHSCAQVDGF
VEYDDADDYLLYLEDILTTIHRAFFELYEQMQSQPGSSDSNTASSQVGNGSSGAAGRPSR
IPDLKTVIPYVRQKVLKDVVLVFTGCLPTNQRPEVAKIYQVAVALGARVHKDLSKEVTHL
VAARPGTAKLVHARKLRNIKVVATQWLWCCAERWEHVSEKLFPLKDAAPEEPLSGRRRNR
LGRPLGPILSPEERQQVEQEAREMSELDRLAGEQQAVLPESFVPSLAIGLEGLAEMGKEV
DDELDDDDDDDDENVDDADSNKQDEDSRLVTPPAKRRRQQQDENDEEEEDALYGEDNSAP
RGWAGKDDDGGIEEDFGGRRTLDWPDHENGVDFGDEEWDSDGESVGEVDEEMAAAVEREL
FS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgcgacagcgtccgttgaactgaacggtgacaggctatttctgaaaactcag
ggtccaatcaaagtccttcgtctaaaagtaaaaccagaattccgcttatacaaaggattt
tgccttctgacatttgaagaaagccaagccttaacaccaagtggtcctcgacctcgatcc
cttaacctaaaatgtccattcgagggaattgtatcgagggttctcgtttctgcgggggcc
gtcatcgaaaatgggtcagtgttattggaactgaaacgatgtgcccatccgatcgttatg
aaagacctatgtgcagaatgcggtgcagatctccgagagttggaagctggcgaggcaggg
gatgcgtccgtttcgatgattcacgctattccagagcttcgaattaacgaacagctttca
cagtcaattggaaaggctgatgaacaacgccttttaggcctgcgaaaacttgttcttttg
gtagacttggaccaaacgctcgttcatacgacaagcgaaatgatccatccaaagttaaag
ggagttgaacatttcactttaccgggaaatcgacagctgtggtatcacacgcgtatacgg
cccggtacggagcgcttccttgaaaagatctctcgcctctttgaattgcacattgtgacc
tttggggcgcgtccttacgcgcatcacatcgcgtcgcttctcgacaaacaaaaaaaatac
tttcaatttcgaatattgtcccgcgacgagtgctttcatccggcaagtaagacagccaat
ttgcgttctttgttcccctgtggcgatcaacttgttgcaatcatcgacgatcgggaagac
gtctggaattttgctgcgaacttggtgaccgtcaaaccttacgtgttttttcgaggggct
ggcgatataaatgccccgatcggtggattagctgagttccattcccttccaccatcggat
ggcggcagttgtagcgccttccttagcccccgaaatcccgtcgttattcattctgatcgc
gatgtggttgcctgcttgcgcgaccttatagaacattcatgcgcgcaggtggacgggttt
gtagaatatgatgatgctgatgactacttattgtaccttgaagatatcttaaccacaatc
catcgcgcctttttcgagctctacgagcaaatgcaaagccagccgggcagcagcgatagt
aacactgcgagcagtcaagtgggaaacggaagctcgggagccgcaggtcggccatcacgc
atccccgacctgaagacggtgattccatacgttcgacagaaagttcttaaggatgttgtg
ctggtgtttactggatgcctgccgacaaaccaacgacctgaagtggcaaaaatatatcaa
gttgccgttgctctcggtgctcgtgtacacaaagacctcagcaaagaagttacccacctt
gtggcagccagacctggaacagctaagcttgtacacgcacgcaaattacgaaatattaag
gttgtcgcaacgcagtggttgtggtgttgtgctgagcgctgggaacatgtatctgaaaaa
ttatttcctctgaaagatgcagcgccagaagagccactgagcggccgacgccggaatcga
ctcggacgacctttgggacctattcttagtcccgaagagagacaacaggttgagcaagag
gcgcgagaaatgtccgagctggaccggctcgctggtgagcaacaggcagtgctgcctgag
tcattcgtaccgtctttggctattggattagagggacttgccgagatgggtaaagaggtc
gacgacgagctcgatgatgatgatgatgatgatgacgaaaatgtagacgatgcagatagc
aacaagcaggatgaggattcacggctcgttactccaccggcaaagcgacgaaggcaacaa
caggacgaaaatgacgaagaagaagaagatgctctttatggcgaagataattccgcacca
cgtggttgggccggcaaagacgatgatggaggtatcgaagaagacttcggcggcaggcga
acactcgactggcccgatcacgaaaacggagtcgactttggtgatgaggaatgggactcg
gacggcgaaagtgttggagaggttgacgaagagatggctgccgccgtagaaagggaactt
ttttcctag
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