KEGG   Varroa jacobsoni: 111258680
Entry
111258680         CDS       T07417                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
vja  Varroa jacobsoni
Pathway
vja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111258680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vja03041]
    111258680
   04121 Ubiquitin system [BR:vja04121]
    111258680
Spliceosome [BR:vja03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    111258680
Ubiquitin system [BR:vja04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111258680
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 111258680
NCBI-ProteinID: XP_022685876
LinkDB
Position
Unknown
AA seq 793 aa
MGSKKNHKDRKRSKRDRRSRSRSSSASSRSESEIYERRRKRPHREEAREEPRKDAGRDCH
DRRRSPSEDHGRVVPDSSRYASYREEKAEQKKRDDTLDRRIAKERARSATPEGPSQEREV
TPEIDDGKEKLSMSIEETNRLRAKLGLKPLQADSEEKKDDENKEVFVRTENISEKKEAEA
FRDKIRTLRKKQEIKRRYEKVKGLADSDEDDDAAKWIAKSRAIADEKARAAKREKMLQEM
ENELGIDDLVKKELKLPKKDYSAKDLEGIEIAHREDRIREGQTVVLTLKDQGVLDDGEDV
LENANLIDDERVERNNLNKKLGVNTYNPYDDAEVDEFGIVHKKNVLSKYDEEISGAKKDS
FKIGVNKEERRQKELEAIRSKLQKQKESLILSLPEVARDYMTIDEMASFKKPKKKIRKIR
KREILKAEDLVPIGEEPAAGSDVDHGYRRRRERPTDDDDILGPDTDLSNIKVEDDLPEQR
YREKLNKSKKVVRPEESIKQVASQIAAIKEEPEEQITSGVNFSSSMVLNATAEFCRTLGT
ISAYTLKEERLEKKPKEEDEVEIDDGNGENVPMEEEEEQRNTWAEVDPSVQRHRTLSART
EDRVTVSKEAMPILEEEPNVSLGVAGALELARKKGYIEDGSKNKPATVKKLQDLQAKNYT
IEEKYYDDEGRGRRSGGAGHYHGPVSDFKDKINYKPEVNIDYIDDSGRPINQKEAFRYLS
HKFHGKGSGKNKIDKRQKKIEQLNKLEQMSSVDTPLNTLKLLQEKQKQLQTPYIMLSGGA
ANALTGPSGLSKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgggttcgaaaaaaaaccacaaggatcgcaaacggagcaagcgcgacagacgttcgaga
tctcgatcgtccagcgctagttctcgatccgagagcgaaatctatgaacgtcgccgaaaa
cgaccgcatcgcgaggaagcccgagaagaaccacgcaaagatgcaggcagggattgtcat
gatcggaggcgttctccatccgaggaccacggcagggtggtaccagacagttcgcgttat
gcctcctatcgagaagagaaggccgaacagaagaaaagggatgatacgttagataggaga
attgcaaaagagcgagctcggagtgcaacacccgaaggaccttcacaggaacgcgaggtt
actcctgagattgacgatggaaaggaaaagctttctatgagtattgaggaaaccaaccga
ctcagagcgaagttgggcctcaagccacttcaagccgacagtgaggaaaagaaagacgat
gaaaataaggaagtgtttgtacgaactgaaaatatttccgaaaaaaaagaggccgaggcg
tttcgagataagattcgcactctgcgcaagaagcaagaaatcaagcggagatatgagaag
gtgaagggtttggctgattctgatgaagatgacgatgcagcaaagtggattgcaaagtcc
cgtgccatagctgacgaaaaagcaagagctgctaagcgtgaaaaaatgctccaagagatg
gaaaatgagctcggtattgatgatcttgtcaagaaagaacttaagttgcctaagaaagac
tacagcgctaaggacctggaaggcatcgaaatcgctcacagggaagaccgtattagggaa
ggccaaacagtggtgcttactctaaaggatcagggagtcctcgacgatggtgaagacgtt
ttagagaatgcgaatcttatagatgacgaacgggtcgaaaggaacaatctaaataaaaag
ctaggcgtcaatacctataatccatacgacgacgctgaggtagacgagtttggcattgtg
cataagaaaaacgtcctctcgaagtacgacgaagagatctccggagcaaagaaggatagt
tttaaaattggtgttaacaaagaggaacgccgccagaaagaactagaagcgattcgaagt
aaactccaaaaacagaaggaatcgcttattctttcgctaccagaagttgcaagggactat
atgaccattgatgaaatggcatcattcaagaaaccaaaaaaaaagattcgcaagattcgc
aaacgcgaaatcctaaaggcggaagacctagtgccaattggcgaagaacctgctgcaggt
agcgacgtcgatcacgggtatagaagaaggcgtgaaaggcccactgatgatgatgatatc
ttgggacctgacactgatctatccaatattaaagtcgaggatgatttaccagaacaaaga
tatcgtgagaaattgaacaagagtaaaaaagtcgtgcgtcctgaggagtcgattaagcaa
gtggcgtcgcagatagctgctataaaagaagaacccgaggagcagattaccagcggcgtg
aactttagctcctcgatggttcttaatgccacagccgaattttgcaggacacttgggact
atctcagcgtatactctcaaagaggagcgtttagaaaagaagcccaaagaagaagacgaa
gtggagatcgacgatggtaacggagaaaacgtgcccatggaagaggaggaagaacaacgt
aacacttgggccgaagtagatccgtcggtgcagaggcataggacactgtctgcacgaaca
gaagatcgagtaacggtctcgaaggaggctatgccgatccttgaggaagaaccaaatgtg
tccttaggagtggctggagcccttgaactagctaggaaaaagggctatattgaggatggg
tccaaaaacaagcctgccactgtgaaaaaactacaagatctacaggctaagaactatacg
atcgaggaaaaatactacgatgatgaaggtcgaggtcgccgaagtggcggagcaggtcat
tatcatggacccgtctctgactttaaggataaaattaattataagcctgaggttaatatc
gactatattgatgacagtgggcgtccaattaatcagaaagaggctttccgttacctttca
cacaaattccacgggaaaggctccggtaaaaacaagatcgacaagcggcagaagaaaatc
gaacagctaaacaagctcgaacaaatgtccagcgtagacactccacttaacacgttgaag
cttctacaggaaaaacagaaacaattacagacgccgtatattatgctaagtggcggagct
gccaatgcgctgaccggacccagcgggctcagtaaaaaatag

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