Varroa jacobsoni: 111258752
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Entry
111258752 CDS
T07417
Name
(RefSeq) m7GpppN-mRNA hydrolase-like isoform X1
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
vja
Varroa jacobsoni
Pathway
vja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111258752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111258752
Enzymes [BR:
vja01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
111258752
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111258752
mRNA degradation factors
5'-3' decay
Decapping complex
111258752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
111258752
NCBI-ProteinID:
XP_022685981
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MATTSSVPQEILNDLSTRFLIHLPPGEKKDPTRLCFQMELAYWFYLDYYAGDGSGLPNLS
MRDFTHALFAHIPGLRKYSKRTDDIIATWKQFKFAVPTFGCILVDDSLEQILLVQGYWSK
GSWGFPKGKINENEKPHKCAAREVQEETGFDCSHMINKKVFLERRVGDHDQRLYIVHGVS
RNTVFLPQTKKEIRSIRWFHLRDLPSFKKDPTPTERLGINSNAFFMIMPFVKPLRKMLNQ
LRQATGKSPLPMLKTPKPASEAGSIPKSKTGPSSVSGDSSTQLSNKINKQQNHRDAQSST
TGSRRSSVEHHARRSLSKLFDEAAKLQDVGDQFTITNNHGIMVNKNTSNSNHNVNNNNHV
NNNVGGKGGKHNKSAKQGKRSAGVGSAGGSTESGRTAGNTYKPPNFDIPAWKNFKLDYDE
YAKLVY
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaacgtcatctgttccacaggaaatactcaacgatttgagtacacgatttcta
atacatctgcctccaggggaaaaaaaggatccgacccggttgtgttttcagatggaactc
gcttattggttttacttagactattacgcgggtgatggcagtggcctgccgaatctgtcg
atgcgagacttcacacacgcacttttcgcccacataccgggacttcgcaaatactctaaa
cgaacagacgacatcatcgcaacatggaaacaattcaagtttgccgtaccaactttcgga
tgtattcttgtggatgactccttagaacagattctattagtccaaggctattggagcaaa
ggatcttggggttttccaaagggcaagatcaacgaaaatgagaagcctcacaagtgcgca
gcgcgcgaagttcaagaagagacagggttcgactgctcccatatgattaacaagaaagta
ttccttgagaggcgcgtgggtgatcatgatcagaggttgtatattgttcacggcgtatcc
cgtaacacggtatttctcccgcaaactaaaaaggaaatccgctcgattcgttggttccac
cttcgagatcttccatcgttcaaaaaggacccaacgccaactgaacgactgggaatcaat
tcaaatgcatttttcatgataatgccgttcgttaagcctttgcggaaaatgcttaatcaa
cttcggcaggctactggtaagagcccgttgccgatgttgaagacgccgaaacccgctagc
gaagcgggatcaattccaaagagcaagaccggtccgagctctgtttctggagacagttca
acacagttatctaataaaattaataaacagcaaaatcaccgagatgctcagagttcgaca
acgggaagtagacgctcgtccgttgagcatcatgcacgaagatcgcttagtaagcttttc
gacgaggctgcgaagcttcaggatgtcggcgaccagtttaccatcacgaacaatcacggc
atcatggttaacaaaaacacaagcaatagcaaccataacgttaataataacaatcatgtt
aataacaatgtgggtggcaaaggtggaaagcacaacaaatctgcaaaacagggaaagcgc
tccgctggagtgggaagcgcaggcggtagcacagaaagtggccgaacagcaggaaacacg
tataaaccaccaaatttcgatataccggcgtggaagaactttaaactagattacgacgaa
tacgccaagcttgtctattaa
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