Varroa jacobsoni: 111258852
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Entry
111258852 CDS
T07417
Name
(RefSeq) mutS protein homolog 4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vja03036
]
111258852
Chromosome and associated proteins [BR:
vja03036
]
Eukaryotic type
Meiosis-specific proteins
Others
111258852
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
PPV_E1_C
nSTAND3
Motif
Other DBs
NCBI-GeneID:
111258852
NCBI-ProteinID:
XP_022686130
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MTTPKYRDDCFAQVTPRRSSLQKSPFVNRRVNAATPTNARETVANISGVTSSGRKAIASA
VASGTSSNSNRGVNKQLKGSVLVCLCNGRGYSTGTVGLAALDLRTNRLFVRQLEDTPNYY
TTCTVLTSLDPMEITMPRTALDARPERQLVKQLKQFFPEVQLTGIERRWYNDCKGVEVLR
KLNMFPQAVPRLDIELRNKYYALASANAIFKYVHTSLFPYVELVQKAAAPRARSLRIDIL
PPVEGICQVDAVTVRELELIASLDVASDAYKYTLFATGPGQRALRLRLLQPLRDLAHIEE
RLDCLTELIDRAALAQDLHTLLSKTIDLERLITNIVKDGLGGGDHATAMANRIQCLLSLK
HNLDLLESFQTILGPYAKEAGSVPGACKQQRISYISILQSFMSDPRFKQISKVINDYFVP
EAFLNRGVLDSLTARIGCIRVEISDTLDQYRRLYAETIEEIDNIRTRAAEKYQLSRLQLA
FSAVRGFHFSLPSSNHSMSMLPPEFIKITHTRSNYHFTTESLLRANERLNWVVNEIYRSS
IIVLQPVVDQIRPHIDSLFKLAEMWTELDVTCSLAILASVNDGFVRPKFSDYVTAVEEGR
HPVLARQWSFEDPDVFHANPVRLTTKDNMIILTGPNNAGKSVYMKQLALLQILAQIGSYV
PAKWAVFRPASKIFARTGYGDDLVNSCSSYMLEVVRVSQVLENVEEDSLIVVDELGCGTS
EEDGAALCFAVASYLSKFKAFVIFSTHFELVTHLERFYPNVSNYHIDAKIENGVLVYKRS
LEEGVTPLTAYGVQTARQNGVQEAICKEAAEVAYTIWLNTKPLKALDQADCLLNLRRQAS
ALRKKAIAFTRAGFAKLTREQTAELVEDIKTLAENKQQVMGIIANCRSRPTAIEYEATTR
NGKDYSSIILQNSVARTPISASPFFPSKE
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaccaaagtatcgtgatgattgttttgcacaagtaactcctaggcggtccagc
ctgcagaaatcgccgtttgtaaacagacgtgtcaacgcggccacacctacgaatgccagg
gagacagttgccaacatctcaggagtcactagcagtggaaggaaagccattgcaagcgcc
gttgctagcgggacctcttcaaacagcaaccgtggcgtcaacaagcaactcaagggaagt
gtcctggtttgtctttgcaatggacggggttactcgactgggaccgtgggtttggcagcc
ctcgatctgcgaacgaatcgcctatttgttcgacagttggaagatacaccgaattactac
acgacttgcacagttctcaccagcttggacccaatggaaatcacgatgccccgcaccgcg
cttgacgcaaggcctgaaagacagttggtcaaacagctgaagcaattctttcctgaggtg
caactcaccggtattgaacgccgatggtacaatgattgcaagggcgtcgaagtccttcgt
aaattgaacatgtttccacaagcggtgcctcgtcttgacattgagctacgcaataagtat
tatgcgcttgcatccgccaatgcgatctttaagtacgtccatactagcctcttcccatac
gtcgaattggtacaaaaggcggccgcgccgagagcccgttcactacgaattgacatactc
ccaccggtagagggaatctgccaagttgatgccgtcaccgttcgcgaactggagttaatt
gcaagcctagatgttgctagcgacgcctataagtacacccttttcgcaactggtccagga
caacgagcactcagactaaggcttctgcagccactgcgagacctagcccatattgaggag
cgtcttgattgtctcaccgaattgattgatcgagctgcacttgctcaggatttgcatact
ttgctaagcaagaccatcgatctcgagcgacttatcaccaacatagtgaaggatggttta
ggcggtggagaccatgcaactgctatggcgaaccgaatacaatgcctgttatccctcaaa
cacaaccttgacctactggaatcctttcaaacaattctggggccgtacgctaaggaggcg
ggttctgttcctggcgcttgcaaacaacagagaatatcctatatcagcatactccaaagc
ttcatgtccgatccgagattcaagcagatctctaaggtcatcaacgactactttgtccct
gaagcgtttctgaaccgtggtgtactagattctctaactgcgcgtattggctgcattcgt
gttgaaatcagcgatacgttagatcagtaccgcagattgtacgcagaaaccattgaggaa
atcgataacatacggacgagagcggccgaaaaataccaactcagtagacttcagctggcc
ttttcagcagtaagaggatttcactttagtcttccgagctccaatcactcaatgtccatg
ttgcctcctgaatttatcaagataacccatacccgttcaaactatcacttcacaactgag
tcacttcttcgggctaatgaacgcctaaattgggtggtaaacgaaatttaccgaagttca
attatcgttctacaaccagtagtagaccaaattcggcctcacatcgacagcctattcaaa
cttgcagaaatgtggaccgagcttgatgtgacctgcagcttagcgattttagctagcgtt
aatgatggctttgtaaggcccaaattctccgattatgttacagctgttgaggagggccgc
caccctgtactggcgcgccagtggtcattcgaagaccctgacgtatttcacgcaaaccct
gttcgactgaccacaaaagataatatgattattctcaccggacctaacaacgccggcaag
tccgtctatatgaaacaattagcactgctacaaattctcgcacagattggaagttacgta
ccggcaaagtgggcggtatttcgaccagcgagcaaaattttcgcccgtacagggtacggg
gatgatctggttaacagctgttcgtcgtatatgcttgaagttgtacgcgtaagtcaggtg
ctggaaaacgtcgaagaagactcattgatcgtcgtggatgaactgggttgtggcaccagc
gaagaagatggagccgcgctctgttttgcagtggcaagttacctgagcaaatttaaggcg
tttgtcattttttccacacacttcgagctcgtaacccatcttgagaggttctatcctaat
gtcagtaattatcatattgatgcaaaaattgaaaacggtgtattagtctataaacggagt
cttgaagagggagtaaccccgctaacagcatatggcgtccaaacggcacgccagaatggc
gttcaggaagcgatctgcaaagaggcagcagaggtcgcatatactatttggcttaatact
aagccgttgaaagcgcttgaccaggctgattgcttgttaaatctgcgacgccaggcgtcc
gctttgagaaaaaaggcaatagctttcactcgagcaggcttcgcgaaattaactcgcgaa
cagacagcggaactcgtggaagacatcaagacacttgcggagaacaaacagcaggtgatg
ggcatcattgcaaactgtcgaagccgacctactgctattgaatatgaagctacaacccgt
aatggcaaagactactcgagtattatacttcagaattccgtagctcgaacaccgatttcg
gccagcccattttttcccagtaaggagtag
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