KEGG   Varroa jacobsoni: 111258852
Entry
111258852         CDS       T07417                                 
Name
(RefSeq) mutS protein homolog 4-like
  KO
K08740  DNA mismatch repair protein MSH4
Organism
vja  Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:vja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vja03036]
    111258852
Chromosome and associated proteins [BR:vja03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    111258852
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II PPV_E1_C nSTAND3
Other DBs
NCBI-GeneID: 111258852
NCBI-ProteinID: XP_022686130
LinkDB
Position
Unknown
AA seq 929 aa
MTTPKYRDDCFAQVTPRRSSLQKSPFVNRRVNAATPTNARETVANISGVTSSGRKAIASA
VASGTSSNSNRGVNKQLKGSVLVCLCNGRGYSTGTVGLAALDLRTNRLFVRQLEDTPNYY
TTCTVLTSLDPMEITMPRTALDARPERQLVKQLKQFFPEVQLTGIERRWYNDCKGVEVLR
KLNMFPQAVPRLDIELRNKYYALASANAIFKYVHTSLFPYVELVQKAAAPRARSLRIDIL
PPVEGICQVDAVTVRELELIASLDVASDAYKYTLFATGPGQRALRLRLLQPLRDLAHIEE
RLDCLTELIDRAALAQDLHTLLSKTIDLERLITNIVKDGLGGGDHATAMANRIQCLLSLK
HNLDLLESFQTILGPYAKEAGSVPGACKQQRISYISILQSFMSDPRFKQISKVINDYFVP
EAFLNRGVLDSLTARIGCIRVEISDTLDQYRRLYAETIEEIDNIRTRAAEKYQLSRLQLA
FSAVRGFHFSLPSSNHSMSMLPPEFIKITHTRSNYHFTTESLLRANERLNWVVNEIYRSS
IIVLQPVVDQIRPHIDSLFKLAEMWTELDVTCSLAILASVNDGFVRPKFSDYVTAVEEGR
HPVLARQWSFEDPDVFHANPVRLTTKDNMIILTGPNNAGKSVYMKQLALLQILAQIGSYV
PAKWAVFRPASKIFARTGYGDDLVNSCSSYMLEVVRVSQVLENVEEDSLIVVDELGCGTS
EEDGAALCFAVASYLSKFKAFVIFSTHFELVTHLERFYPNVSNYHIDAKIENGVLVYKRS
LEEGVTPLTAYGVQTARQNGVQEAICKEAAEVAYTIWLNTKPLKALDQADCLLNLRRQAS
ALRKKAIAFTRAGFAKLTREQTAELVEDIKTLAENKQQVMGIIANCRSRPTAIEYEATTR
NGKDYSSIILQNSVARTPISASPFFPSKE
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgacgacaccaaagtatcgtgatgattgttttgcacaagtaactcctaggcggtccagc
ctgcagaaatcgccgtttgtaaacagacgtgtcaacgcggccacacctacgaatgccagg
gagacagttgccaacatctcaggagtcactagcagtggaaggaaagccattgcaagcgcc
gttgctagcgggacctcttcaaacagcaaccgtggcgtcaacaagcaactcaagggaagt
gtcctggtttgtctttgcaatggacggggttactcgactgggaccgtgggtttggcagcc
ctcgatctgcgaacgaatcgcctatttgttcgacagttggaagatacaccgaattactac
acgacttgcacagttctcaccagcttggacccaatggaaatcacgatgccccgcaccgcg
cttgacgcaaggcctgaaagacagttggtcaaacagctgaagcaattctttcctgaggtg
caactcaccggtattgaacgccgatggtacaatgattgcaagggcgtcgaagtccttcgt
aaattgaacatgtttccacaagcggtgcctcgtcttgacattgagctacgcaataagtat
tatgcgcttgcatccgccaatgcgatctttaagtacgtccatactagcctcttcccatac
gtcgaattggtacaaaaggcggccgcgccgagagcccgttcactacgaattgacatactc
ccaccggtagagggaatctgccaagttgatgccgtcaccgttcgcgaactggagttaatt
gcaagcctagatgttgctagcgacgcctataagtacacccttttcgcaactggtccagga
caacgagcactcagactaaggcttctgcagccactgcgagacctagcccatattgaggag
cgtcttgattgtctcaccgaattgattgatcgagctgcacttgctcaggatttgcatact
ttgctaagcaagaccatcgatctcgagcgacttatcaccaacatagtgaaggatggttta
ggcggtggagaccatgcaactgctatggcgaaccgaatacaatgcctgttatccctcaaa
cacaaccttgacctactggaatcctttcaaacaattctggggccgtacgctaaggaggcg
ggttctgttcctggcgcttgcaaacaacagagaatatcctatatcagcatactccaaagc
ttcatgtccgatccgagattcaagcagatctctaaggtcatcaacgactactttgtccct
gaagcgtttctgaaccgtggtgtactagattctctaactgcgcgtattggctgcattcgt
gttgaaatcagcgatacgttagatcagtaccgcagattgtacgcagaaaccattgaggaa
atcgataacatacggacgagagcggccgaaaaataccaactcagtagacttcagctggcc
ttttcagcagtaagaggatttcactttagtcttccgagctccaatcactcaatgtccatg
ttgcctcctgaatttatcaagataacccatacccgttcaaactatcacttcacaactgag
tcacttcttcgggctaatgaacgcctaaattgggtggtaaacgaaatttaccgaagttca
attatcgttctacaaccagtagtagaccaaattcggcctcacatcgacagcctattcaaa
cttgcagaaatgtggaccgagcttgatgtgacctgcagcttagcgattttagctagcgtt
aatgatggctttgtaaggcccaaattctccgattatgttacagctgttgaggagggccgc
caccctgtactggcgcgccagtggtcattcgaagaccctgacgtatttcacgcaaaccct
gttcgactgaccacaaaagataatatgattattctcaccggacctaacaacgccggcaag
tccgtctatatgaaacaattagcactgctacaaattctcgcacagattggaagttacgta
ccggcaaagtgggcggtatttcgaccagcgagcaaaattttcgcccgtacagggtacggg
gatgatctggttaacagctgttcgtcgtatatgcttgaagttgtacgcgtaagtcaggtg
ctggaaaacgtcgaagaagactcattgatcgtcgtggatgaactgggttgtggcaccagc
gaagaagatggagccgcgctctgttttgcagtggcaagttacctgagcaaatttaaggcg
tttgtcattttttccacacacttcgagctcgtaacccatcttgagaggttctatcctaat
gtcagtaattatcatattgatgcaaaaattgaaaacggtgtattagtctataaacggagt
cttgaagagggagtaaccccgctaacagcatatggcgtccaaacggcacgccagaatggc
gttcaggaagcgatctgcaaagaggcagcagaggtcgcatatactatttggcttaatact
aagccgttgaaagcgcttgaccaggctgattgcttgttaaatctgcgacgccaggcgtcc
gctttgagaaaaaaggcaatagctttcactcgagcaggcttcgcgaaattaactcgcgaa
cagacagcggaactcgtggaagacatcaagacacttgcggagaacaaacagcaggtgatg
ggcatcattgcaaactgtcgaagccgacctactgctattgaatatgaagctacaacccgt
aatggcaaagactactcgagtattatacttcagaattccgtagctcgaacaccgatttcg
gccagcccattttttcccagtaaggagtag

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