Varroa jacobsoni: 111259243
Help
Entry
111259243 CDS
T07417
Name
(RefSeq) patj homolog isoform X1
KO
K06095
multiple PDZ domain protein
Organism
vja
Varroa jacobsoni
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
111259243
NCBI-ProteinID:
XP_022686828
LinkDB
All DBs
Position
Unknown
AA seq
1292 aa
AA seq
DB search
MMLPLLSDTADSSEVLRRLSRQLQRGHPAHKDIQLLLTVLDDPLLRTVLQIKNSLDDLKV
LVHKHPSILPRDFDIARDGTLDYRCDTEDNTQNGSSNNNPLGAASSNGPASVVGGGTSVG
HRLSGSRPHSQPSLHHQQHSHSHHQSHHHHHHGRGDVLHGQQQGANYSGLQSFDEGSGER
FLAVELMAAPLASIGDGQQPGFGGLGLTIVPLTGEDGDTHFYIKHIHPDGVAHRDGRLSE
GDKVVAINGTRLSGLGHRDVVQLLQQYSCNNNNPPAATCEHSSNLQQAGGSDSLGTATTK
IGTNLVSILVDTSQQLHSHQEQVQHLQPQHIGCLDNNDLVNSCWTSDGTPAGPIGQLQSG
EFVPEMVLNTEWAQVEAIELVNDGSGLGFGIIGGRSTGVVVKTILPGGVADRDGRLLSGD
HILQIGEVNLRGMGSEQVAAVLRQAGTSVRLVVARPVDASAAAGLEGLAAPVVPTRILAD
ADQVERHLAMFSNNNNSVDDNNGTTTAASTFVAVVSCASGTTPVTASASSPKPSVLAETP
SATVSSSPGVIIEPLAGTPAQAGSAISADERPSPAGGTGPGPTTPGLGGSLGTLSAPNAP
VASGVGGGGGSSTLPLGVEHSPLSQSSSQSGGKLNQEENIVVAAQDMHTELLSLMGLDQL
QLPEMETFEVELVKDQQGLGITIAGYVCEKGRDEEISGVFVKSVAKGSAADLNGHIRIND
QVIEVDGRPLQGYTNHQAVELLRSTGKVVKLRLARYLRGARYDQLQQAIMAESVHAGAGQ
QLISTAQMLQTQSMTATAAAVSAPPVSQPVSASPLPTGSIGKTNRFQLFPTTSSSTNNLT
SSSCATLAATTIQPTTNAAANPLNNNSNSNNNGPSNNTINNCSSGTSNARNNNSGTPSGN
ASSYAPKSSVALANLDNLIRGTHHLPASGLTRLGSVSGGAITTQENEKEKIAKWTAVFGA
EDYTIVVAQLCKFHEGGGLGISLEGTVDVNEAGEEIRPHHYIRSVLPDGPVGLNGVLRSG
DELIEVNGRQLLGLDHRDVVMTLKDLPLNVEMVCARPKKPLPASVTSCSPTPMTPGAGGL
HGPHGHHHASKAKSDTSLNRYSSEDEESGGGCSMGFVSTSGSYAGIGSNSGGGSGANNKL
NKLRSRSLEPLSGLAMWSNEPQLIELHKAERGLGFSILDYQDPMNPNETVIVIRSLVPGG
VAQQDGRLIPGDRLLFVNDVNLENASLDAAVQALKGAAKGPVRIGVAKPLPLPCPHDGNN
GANGASAGDASAGQTPLGETGTLAALVKSESF
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgatgctacccctgcttagtgatacggcggactcctcggaggtcctacgacgcctttcg
cgtcaactacaacgcggtcaccctgctcacaaggatatccaactactactcacagttttg
gacgacccgcttctcagaactgttttacaaatcaagaactcgctggatgacctgaaggtg
ctggtgcacaagcatccctcgattcttccgcgagacttcgacattgcacgtgacggcacc
ctcgactatcgctgcgataccgaggataacacccagaatggctcaagcaacaacaatcca
ttgggtgcggccagtagtaatgggccagcatcagtggtgggcgggggcacatccgtgggg
caccgtttaagcggcagccgccctcattcacagccatcgctgcatcaccaacaacattca
cactcacatcatcagtctcaccatcatcatcatcatggtcggggagacgtcctgcacgga
caacaacagggtgccaattatagtggtcttcagagttttgatgaaggatctggggagcgc
tttctagcggttgaattgatggctgctccactagcttcgattggcgatggacaacagcct
ggctttggaggccttggcctaaccatcgttcctttgaccggcgaggacggcgacacgcat
ttctacataaagcacatccatcccgatggcgtagcacacagggatggtcgactgagcgag
ggcgacaaggtcgtggcgatcaacgggacccgtctcagcggactcggccatcgggatgtc
gtccaactgcttcaacagtacagctgcaacaataacaatcccccagcagcaacctgtgag
cacagcagtaacctccagcaagcaggaggatcagactcgcttggaacagcaacgacgaag
attggaacgaacctagtcagtatactcgtcgacaccagccagcagctgcacagtcatcag
gaacaagttcaacatctccagccacagcatatcggctgcctcgacaacaacgacctcgtt
aacagctgctggacaagtgacggaacacctgctggtcccataggccagctgcaaagcggc
gagttcgtaccggaaatggtgctgaacacggagtgggcgcaggtggaggcgatcgaattg
gtgaacgatggctcaggactaggttttggtatcatcggaggccgaagcaccggggtcgtc
gtgaaaaccattttgcccggtggcgttgccgacagggacggacggctgttgagcggagac
catatcctgcagatcggagaggtgaatctacgtggaatgggttctgaacaggtagcagca
gtattacgtcaagcgggcacatccgtacgcttggtagttgcgcgaccggtggatgcttct
gcagccgctggactggaaggacttgcggcccccgtcgtacccacaagaatactcgccgac
gctgaccaggttgagcgtcacttagctatgttctcaaacaacaataatagcgttgacgac
aacaacgggacgaccacggccgcctcaacgtttgttgccgtagtctcttgtgcttcagga
acgaccccggtaacggcttccgcctccagcccaaagccgtccgtgcttgcagaaacgccc
tctgccactgtgtcatcatcaccaggggttatcattgaacctttggcagggacgcccgca
caagcaggttcggcgatatcggctgatgaacggccaagtcctgcaggcggaacagggcct
gggcccacaacacctggcctcggtggctccctcggaacgttatcggcgcccaacgctcct
gttgccagtggtgtaggcggcggtggaggcagttctaccctccccctcggcgttgagcac
tcgccgttgtcgcagagttcatctcaaagcggtggcaagcttaaccaggaagaaaacata
gttgttgcggcgcaagacatgcacacggagctgcttagcctcatggggctcgaccagctg
cagctgcccgagatggagacctttgaggtcgagcttgtcaaggatcaacagggactcggt
atcacaattgccggctacgtctgtgagaagggaagagacgaggaaatttccggggtattc
gttaaaagcgtagcaaaaggcagtgcagctgatctcaatggacacattcgaattaacgac
caggttatcgaggtggacggaagacccctgcagggatacacgaatcaccaagccgttgag
ctactcagatctaccggaaaagtagtaaagctacggttggcacggtatcttcgcggggcc
agatatgaccagcttcagcaagcaataatggcggagtcggtacatgctggcgcgggtcaa
caactcatctcaaccgcgcaaatgcttcagacacaatccatgacagcaacagcagcagct
gtatcagcacctccagtatctcagccagtttcagcatcacctttgcccacgggcagtata
ggcaaaacaaatcgatttcaactatttcccacaacatcatcttcaacaaacaacctaaca
agtagcagttgcgccacattggcggccacaacgatacagccaactacaaatgctgcagcg
aacccacttaataacaatagcaatagcaataacaatggcccgagcaacaacacaatcaat
aattgcagcagcggtaccagcaacgcgcggaacaacaatagcggaacaccgagtggcaac
gctagcagttacgccccgaagagttcagtagcgctggccaatctcgacaacctcatccgt
ggtacccatcatctgccagcgtcgggactgacccgtctcggtagtgttagcggcggagcc
attacgacacaggaaaatgaaaaagagaaaattgcgaagtggacggcggtattcggtgca
gaggactacacgatcgtcgtagctcagttgtgcaaatttcatgaaggtggtggactcggt
atctcgcttgagggcacggtggacgtcaatgaagcaggcgaagagatccgtccccatcac
tacattcgctcagttttaccagacggacctgttggccttaatggcgtccttcgcagcggc
gatgagttaatcgaagtcaatggacgacagttgcttggccttgatcaccgtgacgtggtc
atgacgctcaaggatctgcccctaaacgtcgagatggtttgcgcacgaccgaagaagcca
ctgccggcatcggtaactagctgcagtccgacgccaatgacgccaggggcaggtggcttg
cacggaccccatggacatcatcacgcctccaaggcgaagtccgatacctccctgaacagg
tatagttcggaggacgaagaaagtgggggaggttgttctatgggctttgtgagcacttcc
ggcagctatgcgggcattggcagtaattcggggggtggttccggcgctaataacaaactg
aacaagctgcgatcgcgttcgctggagcctttgagcgggctggcgatgtggagcaatgaa
ccacaacttatcgagctgcataaggcggagcggggtctgggttttagcatcctagactac
caggacccgatgaatcccaatgagacggtgattgtgatccgtagtttggtaccgggtgga
gtggcccaacaagatggccgcctgatacccggggaccggctgctctttgtcaatgacgta
aaccttgaaaacgcttcgttggatgctgccgtccaggcgttgaaaggcgccgctaagggc
cccgtccgaataggagttgccaaacccctcccgctaccatgtccgcatgacggcaacaat
ggcgccaatggggcatccgctggcgacgcaagtgctgggcagacgcccttgggcgaaact
ggtacgcttgctgcgctcgtcaaatctgagagcttctag
DBGET
integrated database retrieval system