Varroa jacobsoni: 111259423
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Entry
111259423 CDS
T07417
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vja04121
]
111259423
Enzymes [BR:
vja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111259423
Ubiquitin system [BR:
vja04121
]
Ubiquitin ligases (E3)
U-box type E3
111259423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_3
zf-CCHC_3
U-box
zf-C3HC4_2
zf-CCHC
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
111259423
NCBI-ProteinID:
XP_022687160
LinkDB
All DBs
Position
Unknown
AA seq
1658 aa
AA seq
DB search
MSVHYKFKSSKEFDTVTFDGLHISIGELKKNIIQQKKIGKNADYELQITNAQTKEVYDSD
DTLVAKNTSVLVSRIPIVGANKKNWRRETSDTDALLEAEVAASSVCIANEEGDLLGDNGW
GSKRGPTMTADSRGGAADNYKVIDLAASSTSEEDKIKAVISQSSSEYDSSRFVKRPYFGL
PPATYVCQKCQKPGHWIQKCPNAPVDKGNPRVEVKRSTGIPRSFMVTVDDPTHKGVMLSS
NGELVIPLLDAQAYQERKIEKPPFVPDLEDKPSGIEDKPAIPEELQCSICQDLLCDAVLI
PCCGSCFCDECVRQALLDSDHHECPVCHELDQTPDKLIPNRFLRNKVARLKGDVQKRKDP
QISLPGASTSSSSGNNNSTGQPISKMNEPAEEAQSVVKQPLLPHPDLKEETSRPEPRHDR
RGDENLSGRGSVSTEIRRPPLLSTPGGLRRDGPGDGSENKENGPGDDRDIRDREYRESRE
RDRAGEFRDRDKIMGVPSVDGRGDGASVAGSGYRERDDRWQQARWQRSGSREPPREYDNR
MYDNRDNARRRFDWSPPRFRGGRGYRDFSPRRGAPPRHAEQGPPDHAGDQQVPPAPGTGG
SSGADGSNGGGGGGGGAGASFHPLNPPPMPFPPPGFSLPPPGFPPGPPPPPGPPPPPGTS
SASANNQPPPPGLGPPPLMPPGLLPPFPPLGMLPIPGAPLAAMGVPANQPEREALEEFER
KLSEMRSGRRRRSPSPLGARDHPGHPGHHLHRRRRFSRSRSRSFSPRGGSLRGRRSRSTS
RGRLRSPIRSPLRGRRSASRSPPYGVGGRYRSGSRERYSRPLSRSPEYHTHPLQLGSRRF
TPARSPRRRSPLDREFDSPASLRYRDRSLERSVSPRGGGRRRSRTPRSPLERERNDRPVD
RNDRDAGRGPRPRLQPQQPPRSRSPLSPPRLDDKKSSKGKSSPTEAVIEKKKKKKKKLDD
DERSDRSHGNKESSSRADKTDRSSSSSSSKKKKKKRKNSKDVQEADTTQPEKDEDRDDDR
EREDRHREDREGSVPVVAKIEDVIIEETGGRPGEGNEHDDGPSSQAGDLRPSRSPDGESR
STSQTKEKSPHGRTPRSIRSIRSGRSGRSRSPAPEHDQDTRMSAFSPVRGKSPEQPVVAK
SKWERSSSSEREASPVAATYSKAESIKPKITSEVIHKAEVALISKPPRIQPPPSTTQLSS
KVISLKSIKSRLGEQLKDPKDAIQRGADGRGHSHGHGKDDRKEPASEIQITIQNDKPKRK
PILAPSPSPVRETLKSERVVKKKGAADKEDTGPAEAVGGRRQDTGETKTSASAGAAGRRE
RDDRRRDDRKRRSPENRNRRSRSRERELTRVERERVDRERELQREREREREIQRERELMR
ERDREFQRERERERERERRERSRSRERRERERARLREREEQLREERRKREELERELERQR
RLDAEIERERRKREQIERELRRRKEETRGPKESRKDDRDSKNRKRGRSESEDEERSKDTD
KKKARTPSQASDAESDKKQGQGSRTDRRREPTPPGTTAEDNASSSAKVDETQSRFAAGGD
LDLAFEPDYDLELEPTTGDRKSPDRTKSRESKDEKKEPLSSASSKKRDSDRDREDRESSQ
SSSSSSEEDSEEEERRRRKHRKHKKHKHKKAKKSKKPK
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtacactacaagttcaagtcgtcgaaagaattcgacacggtaacgtttgatgga
cttcatatctctattggagagctgaagaaaaatatcattcagcaaaagaagattggcaag
aacgccgattatgagctgcagattaccaacgctcaaacgaaagaagtctacgacagtgat
gacaccctggttgctaaaaacacctcagtgctcgtctcccgcatacccatcgtgggcgcc
aacaaaaagaactggcgccgcgagacgtcggacacggatgcgcttctggaagctgaggtg
gccgctagcagcgtatgtattgcgaacgaggaaggggaccttctaggagacaacggctgg
ggctcaaagaggggccccacaatgacagctgattcacgcggcggcgccgccgataattac
aaggttatcgatctcgccgcgtcgtcaacttccgaagaagacaaaattaaggcggttata
tcacagtcttcaagtgaatacgactcatcacgttttgtgaaacgaccatacttcggacta
ccgccagctacttacgtatgtcaaaagtgtcaaaaaccaggacattggatacagaagtgc
cccaatgcgccggttgacaaaggcaaccctcgcgtggaagtaaaacgaagtacgggcatt
ccccgaagtttcatggtcaccgttgatgatcctacacataaaggcgtcatgttgtctagc
aatggagaacttgtcataccactcttggatgctcaagcataccaggaacgaaagatagag
aagccaccgtttgttcctgatcttgaagacaagccatcaggtatcgaggacaaaccagct
atccctgaggaactgcagtgttcgatatgccaggacttgctctgcgacgcggtgcttatt
ccgtgctgcggcagttgtttctgcgatgagtgtgttcgccaagcgcttctcgattccgac
catcacgaatgtcccgtctgtcacgagttagatcagacgcccgataagcttatacccaac
cggtttttgcgtaacaaggtggcgcgactcaaaggtgacgtccagaagcgtaaggatccc
cagataagtctaccaggggctagcactagcagcagcagcggcaacaacaatagtacggga
cagccaataagcaagatgaatgagccagcggaagaggctcaatctgttgtgaagcagcct
ctcctaccgcatccggatttgaaagaagaaacaagtcgcccggagcctcgacatgatcga
cgaggagatgaaaatctctctggacgagggtcggtctctacagagattagaagacctcca
cttttgagtacccctgggggactgcggcgtgatggtccaggcgacggatccgaaaataaa
gaaaacggtccaggcgatgatagagacattcgagatcgtgaatatcgggagtcccgtgaa
agggatcgagcaggcgagtttcgcgacagggataaaataatgggagtaccttccgttgat
ggtcgtggagacggtgcaagtgtagccggaagtggataccgtgaaagggatgaccgatgg
cagcaagcccgctggcagagatcaggatcccgagaaccgccaagagagtatgataatcga
atgtatgataatcgggataacgcacgccgacgcttcgattggtcgcctcctagatttcga
ggaggacgtggatatcgagacttctcgccccggagaggcgcaccccctcgacacgctgag
caagggccgcccgatcatgcaggcgaccaacaggtcccgccagccccgggcaccgggggt
tcttccggcgccgatggatcaaacggcggtggaggtggcggcggtggagccggagcttct
tttcatccactcaaccccccaccgatgccctttcccccgcccggatttagtcttcctccg
ccaggattccctcctggacctccaccacctcccggaccaccgccgcctccaggaacttct
tccgcttcagccaataatcaaccacccccgccaggtttgggaccaccccctctaatgcca
cctggtctgctcccgcctttcccaccgctgggcatgctgcctattcctggagcgcccttg
gccgccatgggagtcccagctaatcaaccggaacgtgaagctcttgaagaatttgaacgt
aagctaagcgagatgcgtagcgggcgcagacggcggtccccttctccccttggcgccaga
gaccatccgggtcatccaggacatcatctccatcgacggcgaaggttttctcgtagccgt
agtcgatcgttttcacctagaggcggatcactgcgaggccgacgtagccgttcgacttca
cgcggcagactacgttcacctatacggtcgccacttagaggtcgacgatctgcgagtcgc
tcgcctccatacggtgtcggagggcgctaccgatcagggtcgagggagcgctactcaaga
ccgctgtcccgctctcctgagtatcatacgcatccgctccaactcggctccagaaggttc
acgcccgcgcggtcgccaaggcggaggtctcccctcgatagggagttcgactcgcctgcc
tcgttgagataccgcgatcggtccttagagagatccgtaagtcctcgcggaggaggcaga
agacgatcgcgaaccccacgttcgcccctcgagagggaaagaaacgatcggccagtagat
agaaatgatcgagacgctggtagaggccctcgaccgagactacagccgcagcagcccccg
aggtcaagatcgcctttatctccaccacgtcttgatgataaaaagtcatccaaaggcaaa
tcttccccaacggaagcggtcattgaaaagaaaaagaagaagaagaagaagcttgacgat
gatgaacgaagtgatagaagtcatggaaataaagagtcgtctagccgggccgacaagact
gaccgaagcagtagcagtagcagtagcaagaaaaagaaaaagaagcgaaagaatagcaag
gacgttcaagaggcggacacgactcaacctgaaaaggacgaggaccgcgatgatgacagg
gagagagaggatcgacatcgtgaagaccgtgaggggagcgtgccggtcgtggcgaagatc
gaggatgtaatcattgaggaaactggtgggcgacctggggaaggaaatgagcacgatgac
ggcccgtcatcacaggctggtgacctgcgtccgagtagaagtcctgatggtgaatcgcgt
agtacaagtcagactaaagaaaaatcccctcatgggcgtactccccgaagtattcgtagc
atacgaagtggtcgtagcggtcgaagccgaagtcctgcgccagagcatgaccaagatacc
cggatgtcagccttctctccagttcgcggcaagtcacctgaacagccggttgtggccaag
tccaagtgggaacggtcgagttccagcgaacgtgaggccagtcctgtggcggcgacttat
tccaaagcggaatcgatcaagccgaaaattacctcggaagttatccacaaagcggaggtg
gctcttatttcaaagccgccgcgcatccagccgccacccagcactactcaactctcaagc
aaggttatttcactcaaatcgattaaaagtcgcctcggtgagcagcttaaggacccgaaa
gatgccattcagcgtggcgctgatggtcgtggtcacagccacggccacggtaaagacgat
cgcaaggagcccgctagcgagatccaaattacgatccagaacgacaaaccgaaacgaaag
ccaattcttgcaccgtctccatcgcctgtacgagagactcttaagtctgaacgggttgtg
aagaagaaaggcgcagcagacaaggaagacacgggacctgcggaagcggtcggtggcagg
aggcaagacaccggggaaaccaaaacaagcgcctctgcaggcgcagctggccggcgtgag
agggacgaccgaagacgcgacgaccgcaaacgacgaagtcctgagaatcgaaaccggcga
agtcggtcgcgcgaaagggaactcactcgcgtcgaacgcgagcgcgtcgacagggagcgc
gaactgcaaagggaacgcgaacgcgaacgagagattcaacgggaacgtgagttaatgcgc
gaacgtgatcgtgaattccaacgggaaagggaacgtgaaagagaacgcgaaaggcgcgag
cgaagcaggtcgagggagcgacgcgagcgtgagagagcccgacttcgcgaacgagaggaa
cagcttcgtgaagaacgcagaaaaagagaggaactcgagcgcgaacttgagcggcaaagg
agacttgacgccgaaattgaacgtgaacgtcgtaaacgtgaacaaatagagcgtgagctt
cgtagacgaaaggaggagacccgtgggccgaaagaaagtagaaaagacgatcgcgacagc
aagaatcgcaaacgaggccgaagtgaatcggaggatgaggaaaggtcgaaggataccgac
aagaaaaaggctcgcacaccttcccaagcctcggacgcagagtctgacaaaaagcagggg
caagggtccaggacagaccgtaggcgagagccgacccctcctggaaccacagctgaagat
aacgcatcatcttcggctaaagtagacgagactcagtcccgatttgctgcaggaggcgat
cttgatctggcgttcgagcccgactatgatctggagttggaaccaacgaccggtgatcgt
aaatcgcctgacaggactaagtcccgtgagagtaaggacgagaagaaagagcctttatcc
tctgccagttcgaaaaagagagattcggatagggatcgagaagacagagaaagttcacag
tcgagttcgagttcatcggaagaagattccgaagaggaagagcgccgtcgacggaagcat
cgcaagcataagaaacacaagcacaagaaagctaagaagagtaaaaagccgaaataa
DBGET
integrated database retrieval system
