Varroa jacobsoni: 111259512
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Entry
111259512 CDS
T07417
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
vja
Varroa jacobsoni
Pathway
vja03022
Basal transcription factors
vja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111259512
09124 Replication and repair
03420 Nucleotide excision repair
111259512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vja03021
]
111259512
03400 DNA repair and recombination proteins [BR:
vja03400
]
111259512
Transcription machinery [BR:
vja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111259512
DNA repair and recombination proteins [BR:
vja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111259512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
111259512
NCBI-ProteinID:
XP_022687318
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MGKGEDVLLVMNNVRHKKNDGALYIMASRVAWMPDGKEVLAISHNYADIKLQKISSEGKA
KVQLQVVLNNNESTTFRFINPEGQKAQISDRNQVKDLLMQLLPKFKKKISNDLEEKQKIL
QEDPKLCELYTNLVVGKIIPAEKFWQTYMPKKEPPQPIGVTGSFLVDVKPEASDGGAGFK
YNLTTDTIDNIFKTYPAVEAKYLDYVPHRMSESEFWTAFFQSHYFHRDRLTLGSKDLFAE
CSRQDESEMRTAVSKTLANPLFDLRLHADTDFSDLVSTPATMDTSKLTPNQALIRRFNHH
SLMVVKSSGIQEGSAADAKKARIMDKVDYPDLENPPLAGVRLDLERADKYQTGPIADAVD
HVPMAEAEGALTTISAIVSRWSPAPRQALLPSAAALAALGDLSPGGLLMKTTGGQKGAVK
VKGAVPEAVARELVHVQMELSELLRHLWHCFPVTSGELEKKLENSKASLENFRYRRFIPF
QENLQQNYQNSELTMHMAEMIEAALNKYHNWRKKRHIGFSLAPPPAPQDTSVPVLDL
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggtgaggatgttctcttggtcatgaacaatgtccgccacaaaaaaaacgac
ggcgcgctttacatcatggcatccagggtggcttggatgcccgacggcaaagaggttttg
gccatctcgcacaattacgccgatattaagctgcaaaagatctcatcagagggcaaggcc
aaagtgcagttgcaggtggttttgaacaacaatgaatcgacgacgtttcgattcatcaat
cccgaaggtcaaaaagcgcagatatcggaccgtaatcaagtaaaggatctgctcatgcag
ctgctacctaagttcaaaaagaagatatcgaatgatctcgaagagaagcaaaagattctc
caagaggatcctaagctatgtgagctatacacaaatctggtcgtcggaaagattattccg
gctgaaaagttttggcaaacgtacatgccgaaaaaagagccgccgcaaccaattggagtg
accggttcattcctcgtagacgtgaaacccgaagcgagtgatggtggggcaggctttaaa
tataatcttacaacagacaccattgacaacatctttaagacgtacccagctgtagaggcg
aaatacctcgactatgtcccgcatcgaatgagcgagtctgagttctggacagctttcttc
cagtcacactactttcatagggatcgtctcacgttgggaagtaaggacttgtttgctgag
tgttcgcgtcaagacgaaagcgagatgcgcactgccgtcagcaagaccctggctaaccca
ttgttcgatcttcgattacacgctgatactgatttctcagacctagtatccacacctgcc
accatggatacctcgaaactgacaccaaaccaagcactcattcgccgtttcaatcaccac
tcccttatggtcgtaaagtcttcgggtatacaggaaggctcagctgcggacgctaagaaa
gctcgaattatggacaaggttgactaccccgacttagagaacccaccactggcaggggtc
aggcttgatttagagcgagccgacaagtatcaaacggggccaattgcagatgcggtagat
catgtccctatggcagaagcagaaggtgcactaacgacgatctcagcaatcgtttcccga
tggtcacctgcgccacgtcaagcattattaccgtccgctgctgctttggccgctttggga
gatctgagtccaggtgggttgctcatgaagactactggcggtcagaagggtgctgtcaag
gttaagggcgccgttcctgaagcagtggcccgtgagctagtgcacgtacaaatggaactt
tcggaactgctacgtcatctgtggcattgttttccagttacaagcggggaactcgaaaag
aagcttgagaattccaaagcgtcacttgaaaacttccgctatcgtcgtttcataccattt
caagagaaccttcagcaaaactatcaaaactcggagttaacgatgcatatggccgagatg
attgaagcagcattaaacaaatatcacaactggcggaaaaaaaggcatattggcttctca
ttagcacctccgccggctccacaagacaccagtgtgcctgtgttggacctataa
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