Varroa jacobsoni: 111259831
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Entry
111259831 CDS
T07417
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
vja
Varroa jacobsoni
Pathway
vja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111259831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111259831
04121 Ubiquitin system [BR:
vja04121
]
111259831
03036 Chromosome and associated proteins [BR:
vja03036
]
111259831
03400 DNA repair and recombination proteins [BR:
vja03400
]
111259831
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
111259831
Ubiquitin system [BR:
vja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
111259831
Chromosome and associated proteins [BR:
vja03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
111259831
DNA repair and recombination proteins [BR:
vja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
111259831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_4
Ank
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
RTT107_BRCT_5
PTCB-BRCT
zf-RING_5
zf-C3H2C3
ANK_LRRK2
zf-C3HC4_2
zf-RING_6
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
111259831
NCBI-ProteinID:
XP_022687854
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MEWIRYFVSLTAFGQLPTLVRELEASLECTSCGFTLREPFLSTKCMHVACQQCFINMVCP
VCQRENSECELIPEIRLRESLSTCRQLQYALEASEKLTEGAGGPLRSTTHPENANCNGVS
SRDCENDHMDGDISVSKIPLKKQINSSSNSKMNKKNRLGETPLHVACKKGNLERVKELLT
QGATPNTQDNAGWSPLHEVAQTGNIDIARLLIENGAQVDVASECKTLPIHDAVQAGHPEV
IRLLLEYGANPEQKNGEGQSALDLAGYNDIIKGVVVDFMANPQRKAIPVVKERGEPGRPS
PPAGPPVIMSSSLKGSDVQAFTKCASQIGGEIVSRFDPRVTHLVVATDETGNTQRTLKFL
QCVAAGCWIVSAAWAHKCLAMGRRVDETPFEVRGCRQFAGNEAPRNSRENRASGSSGLLS
GFSIYFAPLDSPMVPSIEELTTMCELAGATILKREPKTQTGNPVSSPHVKPGSLLASHSS
FIVGAPSAVVKAGILWLSRDWVIDSISHFELQDIFI
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggagtggataagatacttcgtgagtttgaccgctttcgggcaactgccaacgctcgtt
cgcgagctcgaagcatcgcttgagtgtacctcctgcggattcacccttcgcgagccgttt
ctttcaaccaaatgcatgcatgttgcatgccaacaatgcttcataaacatggtctgtccg
gtttgccagcgtgaaaatagcgagtgtgagcttatccccgagattcgtttgcgcgagtct
ctttcaacatgtcgacaacttcagtacgctcttgaggcatcggaaaagcttaccgagggt
gcaggtggtccgctccgtagcacaactcacccagaaaacgccaactgcaacggggtttcc
tcgagagactgcgaaaatgatcacatggatggggatatttctgtctcgaagatacctctg
aagaaacaaattaactcttcctcgaattcaaagatgaacaaaaaaaatcggttaggagaa
acaccattgcacgtcgcttgcaaaaaaggaaatctcgaacgagttaaagaattgttgaca
cagggagcaactcctaacacgcaggacaatgccggctggtccccgctacatgaagtagca
caaaccggcaatattgatattgcgcgacttctaattgaaaacggcgcccaggtcgatgta
gcctcggaatgcaagaccctacccattcacgacgctgtacaggctggccatcctgaggtg
attcgtctactgcttgagtatggtgctaaccctgaacagaagaatggtgaaggccagtca
gctcttgacctcgccgggtacaatgatatcatcaagggtgtggtggttgacttcatggca
aaccctcaacgaaaggctataccagtagtgaaagaaagaggagaacccggaagaccatca
cctccggcgggaccgccggtcatcatgtcatcctcgttgaaaggttctgatgtccaagct
ttcaccaagtgcgcgtcccagattggtggagaaattgtctcccgatttgacccgcgggtt
actcatctagtggtggctactgatgaaactggcaatacccaacgtacgctgaagttccta
caatgtgtggcggccggctgttggattgtatcggctgcttgggcgcacaaatgtctggcc
atgggacggcgtgtcgacgaaacaccgttcgaagttcgtgggtgtcgtcagttcgcagga
aacgaagccccaagaaactcccgcgaaaaccgcgccagtggttcgtctggtctgctcagt
gggttcagcatctattttgctcctcttgacagtccaatggtgccgtcaattgaagaactg
acgacaatgtgcgagttggcaggcgccacaatactgaagcgtgagccaaaaacccaaaca
ggtaaccctgtgagcagccctcacgtgaagcctggttctcttttagcttcgcactcttcg
tttattgtaggagcgccatctgctgtagtcaaagcgggtatactatggcttagtcgagac
tgggtgattgattcgatctcacacttcgaactgcaagatatttttatataa
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