Varroa jacobsoni: 111260187
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Entry
111260187 CDS
T07417
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vja04040
]
111260187
Ion channels [BR:
vja04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111260187
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
111260187
NCBI-ProteinID:
XP_022688494
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MALAEQVALNQLEMDHDTVRTTVLHVNGRNVSWASDNKVIPNNLIPIAVTSAGKKKQAGK
ELLEKATLDSQKLPLSDQSDQPNGGFRNALSSAIRVLTCRYHDDNDDDDDLLETKVVPAS
DRFLPAVNEVLADGRTKAPKTGACGATCDIRNSPNRILKAAEKGNMAEFQRLLAADERRL
QFRDSRGRQAIHHAAAHNRINILEFILNRPNVDLRPLDNEGNTPLHSACINGAAQAIAFF
INNDPEQLQCFNKEHQSPLHVATQLNKVASLKALCNFKDKIDVEQRSKHGRTALHIACIS
DNAEAALVLLRDFAASPKTTCDNGFYPIHEAAKNASANAMRVLLEFCESIGIPRADMMKL
FDADGNVPLHSAVHAGDLKAVELCLESGALISTQQHDLSTPVHLACSQGAIDIVKLMFRC
QPDQKMGCLTCADAQNMTPLHCAAMFDHVELVNFLVDEGASLNATDKEGRSVVLLAAARS
AWKTVTSVLKLGADLGLQRDNQGRNLLHHIVLSSGSIEEFTTSINDRLEDFIQLLNERDS
YGCTALHYAARNGQLKSIQSLIALGASVNLKNNENQSPLHFAAMFGRFNTVRHLLDSKKG
HLIINEMDGMGKTPLHLASQCGHVRVVHLLLVKGALLHRDHKGRTPLHYASMNGYNNTMD
QLLAVHSHLLDQTDRDGNTALHMAAMKNRSSTAINLLNLNCKIIKNGLDMTPMDYALHYK
HSEVAMAMVIHPSRSDEVMTCQVKTYSCLVEGLIAVMPEVMTTVLDRGISKSKMSHDSDE
YFVKYSFTCLQNSEGADVVPMTDEPLPVMNIMVRYGREELLSHPLSVKYLETKWNAYGIY
FHILNLMVYTVFLCFLTLNAVQLMQDNKKRHQGISSFEVADAFVRPSLATLSSMTSVVVL
SFVLVNVVKEAFQLIQQRTKYFVDVMNILEWTLYLAAGLMALSQLTRIEEKSYQNIVAAV
AVFLAWFNYLLFLQRFNRVGLYVVMFLEILSTLLRVVMVFSVLIIAFGLSFHILLARVDL
TVQQPIFDHRTGNVTFKPISLGDKGFHTPLVSLIRVGTMMLGELDFLGTYLRPLRNLENS
TWYQIVAATLFLVAFIILMPILLMNLLIGLAVGDIETVRRNAQLKRLTMQVRLHTDLERK
LPKRILDSVDRTEVSIHPNQKGTGNIFWRTIKRWFGSPRNNGNGVQSRNSKNLHKSFTQF
IESNINDIHQQLGRQKDKIREISRNMEMQVTLLRLLVSKMEIKSEAEELDEGEFNSASLA
RDTAEQVDGDSATDIK
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggcattagcagaacaagttgcgctcaatcagttggagatggaccacgatacagttcgc
acgaccgtgttgcacgttaacggacgaaacgtgtcttgggcgtcagacaataaagtgatt
ccgaacaacctgattcccatagcagtaacgtcagcgggaaaaaaaaaacaggctggcaag
gagctgctcgagaaggcgactcttgacagtcaaaagttacccctgtcggatcaatcggat
caaccaaatggaggtttccgaaatgcgctttcatctgcaatcagagtgcttacatgcaga
tatcacgatgataacgatgacgacgacgatctgctggagaccaaagtggtgcctgcaagt
gaccgttttctgcccgcagtcaacgaggtcctagcagatggccgaacaaaagcgccgaaa
actggtgcctgtggcgccacctgtgacattcgcaatagtccaaaccgtatccttaaagcc
gctgaaaaaggcaacatggccgaatttcagcggctgcttgcagctgatgagcggcgacta
cagtttcgggattcgcgtgggagacaggccatccatcacgctgcagcacataaccgaatc
aacattctcgagtttatcctcaacaggcctaacgtggatctccgcccattagataatgaa
ggcaacacgccgcttcattcggcctgtataaacggggcagctcaagccattgcatttttc
atcaacaacgatcctgaacagctgcaatgcttcaacaaagagcatcagagcccgctgcat
gtcgccacgcagctaaacaaagtagcttccctcaaagcgctttgcaattttaaggataag
atcgacgttgaacagaggagtaagcacggaagaacggcactacatatcgcgtgcatctcg
gataatgctgaagcagcactcgtactcttgcgtgacttcgcggcgtcgccgaaaaccact
tgcgacaatggcttctaccctatacatgaggcggcgaaaaacgcgtccgccaacgcaatg
cgagttctactggagttctgcgagtcgattgggatcccccgagcggacatgatgaagctt
ttcgatgccgatggcaatgttcccctacactcagcggtacacgcaggcgatctgaaagct
gtcgagctctgcttagaatccggtgccctgatctcaacacaacaacatgacctgtctacc
ccagtgcatttggcctgctcgcagggagccatcgacatcgtcaaacttatgttcagatgt
cagcccgaccagaaaatgggctgtcttacgtgcgcggatgctcaaaacatgacgccattg
cattgcgctgccatgttcgatcatgtagaactcgtaaattttttggtagatgagggagcg
tctttgaatgctacagataaggaaggtcgatctgttgtgctgcttgcagccgccaggagc
gcgtggaaaactgtaacaagtgtcctaaagcttggggcagacttgggtcttcaacgcgac
aatcagggccggaatttactgcaccatatcgtgttgagtagtggttctatcgaagagttc
accacaagcattaacgacagacttgaggatttcatccagttacttaatgagagggactcg
tatggttgtacagcactacactacgccgcgcgtaacggccaactaaaaagtattcaatct
ctaatagccttaggagcttctgtcaacctgaaaaataatgaaaaccagtcacctctacac
ttcgcagcgatgttcggacgcttcaacacggttcgtcatctactcgacagtaaaaagggt
catctcatcattaacgagatggacgggatgggaaagacgccacttcaccttgcttcgcaa
tgcggacacgtgcgcgtcgtacatctactgcttgtaaaaggtgctcttctgcatcgagac
cacaagggtcgtacgccactccattatgcctcaatgaacggttataacaatacaatggat
cagttacttgctgtacactcgcatttgctggaccaaacggatcgagatgggaatacagcc
ctccatatggcagcgatgaaaaaccgctcaagtactgcaatcaatctactcaacttaaat
tgcaaaataataaaaaacggtctcgatatgacccctatggactacgccctccattacaaa
cattctgaggtcgctatggctatggtgattcatccgtcaaggagcgacgaagtaatgacg
tgtcaggtgaaaacctacagctgtctcgttgaaggattgattgcagtgatgcctgaagtc
atgacgacggttctcgatagaggcatttcgaagtccaagatgagccacgattccgacgaa
tattttgtaaaatacagtttcacatgtctccaaaattcggaaggggcagatgtggtccct
atgacagatgaacccttacccgttatgaacattatggtgcgctatggccgcgaagagctg
ctgtcccatccgttaagcgtcaaatatctcgaaacaaaatggaatgcgtacggaatatat
ttccatatattaaatctgatggtttatacagtttttctgtgtttcctcactctaaacgcg
gtgcaactaatgcaggacaacaaaaaaaggcatcagggaatatctagtttcgaggttgct
gatgcgttcgttcggccttcgcttgcgaccctgtcatcgatgacatctgtggtcgtatta
tcattcgtcctagttaacgttgtcaaggaagcctttcagttgatacaacagcgaacaaaa
tattttgtggatgtaatgaacatactcgaatggactctctatttggcagccggtttaatg
gccctctcacagctgactcgaatagaggaaaaatcataccagaacatcgttgcagcggta
gcagtttttctagcttggttcaactatctactatttctacaaaggttcaaccgagtgggc
ctctatgttgtgatgttccttgaaattttatcgacgctcctgcgcgtcgttatggtattt
tcggtcttgatcatcgcgtttggcttatcattccacatcctattggctcgcgttgacctt
accgttcagcagcctatcttcgaccatagaacaggaaacgttacgttcaagccgattagt
cttggtgacaaaggcttccatacgccgcttgtgtcgctgatccgagtgggcacaatgatg
ctaggcgaactggacttcttgggcacatatctgcgccccttacgaaatttagaaaactca
acatggtatcaaattgtagcggctaccctattcttggtggcctttatcatcctgatgcct
attctcctcatgaatctcttgataggtttggccgtcggtgacattgagacggttcgtcga
aatgcacaactaaaacggttaacgatgcaggttcgtctgcatactgatcttgagagaaaa
ctaccgaaaagaattctcgatagcgtcgaccgaaccgaggtgtctattcatccaaatcaa
aaaggaactgggaacattttctggcgcaccatcaaacgctggttcggaagcccacgaaac
aacggcaacggagtccaaagcagaaacagtaaaaaccttcacaagtcgtttacgcagttc
atcgaaagcaacatcaatgacatccaccaacaactgggccggcagaaagataagattcgt
gagatcagccgaaatatggagatgcaagtcacgctgcttcgtttactcgtgtcgaaaatg
gaaataaaatccgaggcagaagaattagacgaaggagaattcaatagcgctagtttagct
agagacactgcagagcaggtcgatggagacagtgctactgatataaagtag
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