Varroa jacobsoni: 111260331
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Entry
111260331 CDS
T07417
Name
(RefSeq) DNA excision repair protein haywire-like
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
vja
Varroa jacobsoni
Pathway
vja03022
Basal transcription factors
vja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111260331
09124 Replication and repair
03420 Nucleotide excision repair
111260331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vja03021
]
111260331
03400 DNA repair and recombination proteins [BR:
vja03400
]
111260331
Enzymes [BR:
vja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111260331
Transcription machinery [BR:
vja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111260331
DNA repair and recombination proteins [BR:
vja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111260331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
111260331
NCBI-ProteinID:
XP_022688713
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MSYYKGKKDYGNRGNASGGGYNKFRRGAQNTASGGQPDGDEEGDNFSLEGVPDAASRKLQ
EKAVDDEYGAKDYRSQMILKEDHASRPLWVSGDGHIFLEAFSPVFKHAHDFLIAISEPVC
RPEFIHEYKLTSYSLYAAVSVGLQTDDIIEYLRRLSKTSIPEGIIEFIKMCTESYGKVKL
VLKQNRYFVESSHPEVLQKLLKDPVIQNCRLKRSEDDVELFSEGAVKQTAAPGSKLSEAS
EKTEVPSDIFDFYSRMENEDEEEPERKTKVVSFEVMQDKIEDIQRRCIELEYPLLAEYDF
KNDTHNPDINVDLKPSALLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLTGVTACCTV
RKRCLVLCNSGVSVEQWKAQFKMWSTADDSMICRFTSEAKDKPIGCGICITTYSMITHTQ
KRSWEGEQVMQWLKEQEWGMMLLDEVHTIPAKMFRRVLTLVQAHCKLGLTATLVREDDKI
ADLNFLIGPKIYEANWLELQKAGYIAKVTCSEVWCPMTPEFYREYLSARSAKKCLLFVMN
PNKFQICQYLIQYHERRKDKIIVFSDNVFALKHFAEKLRKPFIFGPTSQAERMQILQNFK
YNPLVNTIFVSKVADTSFDLPEANVLIQISAHGGSRRQEAQRLGRILRAKKGTSNAFFYS
LVSQDTMEMYFSRRRQRFLVNQGYSYKVITELEGLHEEEGILYRNKQDQLRLLAQVMQAG
DQDEDEGIPTESPFQMKTQKKAGGAAGLSGADAGDMYAEVRRSKNDMNRHPLFKRFKGIG
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgagttattataaagggaaaaaagattatgggaaccgaggcaatgccagtggcggtggc
tacaataaatttcgtcgaggagcgcaaaataccgccagcggtggacagcctgacggtgac
gaagaaggcgataatttttcgcttgaaggcgttcctgacgcagccagcaggaaactccag
gagaaagcggtcgatgacgagtacggggcaaaggactatcggtcgcagatgattcttaag
gaagatcatgcttcgcgaccactttgggtgtcaggtgatgggcacatcttcttggaggcg
ttttcacctgtgtttaagcacgcccacgatttcctgatcgcaatatccgagccagtctgc
cgacctgaattcattcacgagtacaagctcacttcatattcgctttatgcggcagtatct
gttggattgcaaactgatgatatcattgaatatttacgacgtcttagtaaaactagtatt
ccagaggggattattgaatttataaagatgtgcaccgaatcgtatggcaaagtgaaactc
gttttaaaacaaaatcgctactttgttgaaagtagccacccagaagtgcttcagaagctt
ttgaaggatcctgtcattcagaattgccgcttaaagagaagcgaagatgacgttgagctc
ttttcagagggtgcggtcaaacaaacggcggcaccaggttcaaagcttagtgaagcctcc
gaaaaaacggaagtgccttcggacattttcgatttctattcccggatggagaatgaggac
gaagaagagccagaaagaaaaacgaaagtagtgtcattcgaagtgatgcaagataaaatc
gaagacatacaaaggcgctgcatcgaactcgagtatccacttttggcagagtacgacttc
aagaacgacacacataatcctgacattaacgtagatttaaaaccatcagctcttcttaga
ccttaccaggagaagtcgcttagaaagatgtttggtaacggccgcgctcgctctggagtc
atcgtcttaccttgtggagccgggaaatcacttacaggagtgactgcgtgctgcacagta
aggaaacgttgtttggttctatgtaactctggcgtgtcggtggaacaatggaaggcacag
ttcaaaatgtggtcaactgcggatgactcaatgatttgccgctttacatcggaagcaaaa
gataaaccaataggttgcggcatctgtattacgacctattccatgatcactcatacacaa
aaaaggagctgggaaggtgagcaagtgatgcaatggttaaaggagcaagagtggggtatg
atgttgcttgacgaggtgcatactattcctgccaaaatgtttcgccgagtgctcaccctt
gtacaagcacactgcaaactcggcctgacagctacgttagtgcgagaagacgacaaaatt
gccgatctcaactttttgattgggccaaagatatatgaagcaaactggttggagctgcag
aaagcagggtatattgctaaggtgacctgttccgaagtttggtgcccaatgactccggag
ttctatcgcgagtacctatcggcacgatcggcaaaaaagtgtttgttgtttgtcatgaat
ccaaacaaatttcaaatctgtcagtatcttattcagtaccatgagcgaagaaaggataag
ataattgtcttttcggataacgtgtttgctttaaaacactttgccgagaagctaagaaag
ccttttatttttggaccaacatcacaggcagaacgtatgcaaatattacagaacttcaag
tacaacccattagtaaacaccattttcgtatcgaaagttgcggacactagctttgatctt
ccggaggcaaatgtcctcattcagatttcggcccacggtggctcacgaaggcaagaggcc
caacgcctggggcgaatcctacgtgcaaaaaaggggacttccaatgctttcttctattca
ctggtatctcaagatactatggaaatgtatttctcacgccgtagacaacggttcttggtc
aatcaaggttacagctataaggtgattacggaattagaaggccttcacgaagaagaggga
attctttacaggaacaaacaagatcaactccgattacttgcacaggtcatgcaagcagga
gaccaagatgaggacgaaggtattcccaccgaatcaccattccaaatgaaaactcaaaag
aaggccggcggcgcggccggtttatctggagcagacgcgggcgatatgtacgccgaagta
cggagatccaagaatgatatgaacagacatccacttttcaaacgcttcaagggcatcgga
aaatag
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integrated database retrieval system
