Varroa jacobsoni: 111260800
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Entry
111260800 CDS
T07417
Name
(RefSeq) probable tRNA-splicing endonuclease subunit sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vja03016
]
111260800
Enzymes [BR:
vja01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
111260800
Transfer RNA biogenesis [BR:
vja03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
111260800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
111260800
NCBI-ProteinID:
XP_022689547
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MEINSIEEDVIVTVESLVNKVSDMAALRAIADEESTDEDTLQESSANRKQSAGDSPHDDS
DSEEITSSLLQLIELPAGIFVFNARDISKLRLTHRIVGSMCGPLQSQPGHAQAAPPLKLR
PEETRLLLECGIATLVSPSTLNCVPPQEKLKAFDQFNRRLHEVSNIERYRDKLQAVCNPP
HRPRILKKRPPNPSGVPYQPKPYDEKDPFTVQLVDTPFSTTMSVSSLPYIRSISNSPEAE
LRYQVFRELWDQGNYIGGASNFGADFLVYRGDPSAYHAYACIKCLPVGSRVTAADLVRYC
RISNTIKKNFVFASLVNHHVRFVTVTWEV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggagatcaattccatcgaggaggacgtaatagtgacagtggaatccctggttaacaag
gtatcagatatggcggccctacgggctatcgccgatgaagagtcgacggacgaggataca
ctgcaagagagttcggcaaaccgaaaacagtcagcaggtgattcaccgcatgacgacagc
gattctgaagaaattacttcgtctcttttgcagctgatcgagttgcctgccgggatcttc
gttttcaatgctagagatatcagcaaattacgtttgacacatcgaatcgtcggctcaatg
tgcggtccactgcagagccagcctggtcatgcacaggcagctccgccattgaaattgcgc
cctgaggagactcgactcctgctcgaatgtggcatcgccacgttagtttcaccatcaact
ctcaattgcgttccaccgcaggaaaaattaaaggccttcgatcaattcaaccgtcggtta
catgaagtgtcgaacatagagcggtacagggataaactgcaagctgtttgtaacccacct
catcgaccaaggatcctcaagaaacgccctcctaatcctagtggagttccataccagccg
aaaccgtatgatgaaaaagacccgtttacggtgcaactagtggatactcctttcagcacc
actatgtcggtgtcatcattgccgtatattagatcaatttctaattcacctgaggctgaa
cttcgttaccaggtgtttcgtgaactctgggatcaggggaactatatcggtggagcttct
aatttcggtgctgactttctcgtttatagaggtgatccctcagcttatcatgcgtatgcg
tgtataaaatgtttaccggtaggatcgagagtaacggcggctgacctggtgcgctattgc
cgtatcagtaatacaatcaagaaaaattttgtctttgcttctcttgttaatcaccatgtt
cgctttgtcaccgtaacgtgggaggtatag
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